Gene Information

Name : Rahaq_1354 (Rahaq_1354)
Accession : YP_004212104.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 1478229 - 1478951 bp
Length : 723 bp
Strand : -
Note : KEGG: pwa:Pecwa_2880 glutamine ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGATTGAATTCAAGAACGTCTCAAAACACTTTGGTAAAACCCAGGTGCTCCACGACATCGATCTGAACATTTCTCAGGG
TGAAGTCGTGGTTATCATCGGGCCATCCGGCTCCGGTAAATCCACGCTGCTGCGCTGCATCAACAAGCTGGAAGAAATCA
CGTCCGGCGAGCTGATTGTTGATGGCCTGAAAGTGAACGACCCGAAAGTCGATGAACGTCTGATCCGTCAGGAAGCCGGT
ATGGTGTTCCAGCAGTTCTACCTGTTCCCGCACATGACAGCGCTGGAAAACGTGGCTTTCGGCCCGATCCGCGTTCGTGG
TGCGTCGAAGGATGAAGCCAATAAACTGGCGAAAGAACTGCTGGCAAAAGTGGGCCTGTCTGAACGCGCCAACCACTATC
CGTCAGAGCTTTCCGGTGGCCAGCAGCAGCGCGTGGCGATTGCCCGTGCACTGGCGGTTAAGCCAAAACTGATGCTGTTT
GATGAGCCAACCTCGGCGCTGGATCCTGAACTGCGTCACGAAGTGCTGACCGTCATGAAGCAGCTGGCAGAAGAAGGCAT
GACAATGGTTATCGTGACCCACGAAGTCGGCTTTGCCGAGAAAGTGGCTTCACGCTTAATCTTTATCGACAAAGGCCGTA
TTGCTGAAGACGGTAAACCGGCTGATCTGGTGAACAACCCGCCGAGCGAACGTCTGCGCGAGTTCCTGCAACACGTTTCC
TGA

Protein sequence : 
MIEFKNVSKHFGKTQVLHDIDLNISQGEVVVIIGPSGSGKSTLLRCINKLEEITSGELIVDGLKVNDPKVDERLIRQEAG
MVFQQFYLFPHMTALENVAFGPIRVRGASKDEANKLAKELLAKVGLSERANHYPSELSGGQQQRVAIARALAVKPKLMLF
DEPTSALDPELRHEVLTVMKQLAEEGMTMVIVTHEVGFAEKVASRLIFIDKGRIAEDGKPADLVNNPPSERLREFLQHVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-31 42
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-31 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_1354 YP_004212104.1 ABC transporter NC_012469.1.7686878. Protein 3e-35 45