Gene Information

Name : Rahaq_1259 (Rahaq_1259)
Accession : YP_004212009.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Unknown
Product : class I and II aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 1340826 - 1342040 bp
Length : 1215 bp
Strand : -
Note : PFAM: aminotransferase class I and II; KEGG: yen:YE1341 aminotransferase AlaT

DNA sequence :
ATGTCCCCGATTGAAAAATCCCGCAAACTGGACAACGTCTGTTATGACATTCGCGGCCCGGTGCTCAAAGAAGCAAAACG
TCTTGAAGAAGAAGGTAATAAAGTCCTCAAGCTGAACATCGGCAACCCTGCGCCATTCGGTTTTGATGCACCTGATGAAA
TCCTGGTCGACGTTATCCGCAACCTTCCTACCGCACAGGGTTATTGTGATTCGAAAGGTCTGTTTTCTGCACGTAAAGCG
ATCATGCAGCACTATCAGGCACGCGACATGCGCGACATCACGGTCGAAGATATCTATATCGGCAACGGTGTTTCCGAGCT
GATTGTTCAGTCAATGCAGGCATTACTTAACACCGGCGATGAAATGTTAGTCCCGGCACCTGATTACCCCTTGTGGACAG
CGGCGGTTTCGTTATCAGGCGGTAATGCGGTGCATTACCTGTGTGATGAAGGGGCTGACTGGTTCCCGGACATTGCCGAT
ATTCGTGACAAAATCACCCCACGCACCCGCGGCATTGTGATCATCAACCCGAACAACCCGACCGGTGCGGTATACAGCAA
AGAATTGCTGATGCAGATTGTGGACATCGCCCGGGAACATAATCTGATTATTTTTGCCGACGAAATTTACGACAAAATCC
TGTATGACGAAGCCCAGCACATTTCCATCGCTTCACTGGCGCCGGATTTACTGACCGTCACTTTTAACGGTCTGTCAAAA
ACCTACCGCGTGGCCGGTTTCCGTCAAGGCTGGATGGTTCTGAACGGACCGAAGAAACATGCGAAAGGTTATATCGAAGG
TCTGGAAATGCTGGCCTCGATGCGCCTTTGTGCCAACGTGCCGATGCAACATGCCATTCAGACCGCGCTGGGCGGCTATC
AAAGTATCAGCGAGTTTATTCAGCCGGGCGGACGTCTGGTCGAACAGCGTGATCGTGCATGGGAACTGATCAATGAAATC
CCGGGTGTTTCCTGCGTGAAACCTAAAGGGGCGCTGTATATGTTCCCGCGCATTGACGCCAAACGTTTCAACATCCATGA
CGATCAGAAAATGGTGCTCGATTTGCTGTTACAGCAAAAAGTCTTGCTGGTTCAGGGTTCTGCATTCAACTGGCCGTATC
CGGACCATGTGCGTATCGTGACGCTGCCACGCGTTGATGAGTTGGAAATGGCCGTTAACAAACTGGGACGTTTCCTCGAA
ACCTATCGCCAGTAA

Protein sequence :
MSPIEKSRKLDNVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIRNLPTAQGYCDSKGLFSARKA
IMQHYQARDMRDITVEDIYIGNGVSELIVQSMQALLNTGDEMLVPAPDYPLWTAAVSLSGGNAVHYLCDEGADWFPDIAD
IRDKITPRTRGIVIINPNNPTGAVYSKELLMQIVDIAREHNLIIFADEIYDKILYDEAQHISIASLAPDLLTVTFNGLSK
TYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPMQHAIQTALGGYQSISEFIQPGGRLVEQRDRAWELINEI
PGVSCVKPKGALYMFPRIDAKRFNIHDDQKMVLDLLLQQKVLLVQGSAFNWPYPDHVRIVTLPRVDELEMAVNKLGRFLE
TYRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-119 62
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-119 62
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 5e-119 62
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-119 62