Gene Information

Name : Rahaq_1245 (Rahaq_1245)
Accession : YP_004211995.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Virulence
Product : LacI family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1609
EC number : -
Position : 1326438 - 1327454 bp
Length : 1017 bp
Strand : -
Note : KEGG: enc:ECL_03647 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI

DNA sequence :
ATGTCCATTAACAAGAAAAGACGCAGTACCGGAAGAGTGACGCTGGCTGATGTCGCGCAACTGGCGGGCGTGGGCAGCAT
GACTGTTTCCCGTGCGCTGCGCACACCCGAACAGGTCTCCGACAAGCTACGGGAGAAGATCGAAGAAGCGGTCAGTCAGC
TGGGATATCTGCCCAACCAGGCCGCCAGTTCCCTGGCTTCCGCCTCCTCAAATACCATTGCGATGATTGTGCCGAGCCTT
TCCGAAGCGGGCTGCGCCGAGATGTTTGCCGGGCTACAGAAAGTGCTGCAACCGGCCGGTTATCAGATCATGCTGGCGGA
ATCTCAACATCGTATTGAGCGGGAAGAAAAACTGCTGGAAACGCTGCTTTCCTACAATCTGGCGGCGGCGATTTTACTGT
CCGTTGAACACTCCGCCAATGTACGTCAATGGCTGGATAACCTGACCATCCCGGTGCTGGAAATCGGTGCGCTGACCAAT
TCGCCAATCGACATGAATATCGGCATTGATTATGTCGAGGCGATGTTTCAGTTGACCCAGACGGTGGTGGCGAAGGGATA
TCAGAATATTGGCATGCTGTGTGCCAATCAGGAACAGTGGATTTTCCAGCAGCACCTTCAGGGTTGGCGTAAGGCCATGT
TGAAAGCGCATATGTCCCCGCACCGGGTGATAAACGCCGCCGAGCCCGCCAGCTTTTCCACCGGCGCTCAGCAACTGCCG
GAGTTCCTGCTTGCCTGGCCGGAAATTGACGCGCTGGTGTGTGTTTCCGACGATCTCGCCTGTGGCGCACTGTATGAATG
CCAGCGCAGACGCATCAAAGTGCCAGATGAACTTGCCGTGGTCGGTTTCGGCAATGCCGATGTCAGTAAAGTATGCCAGC
CGCCGCTGACCACTATTGCTATTCCGCATAAAGAAATCGGGGTGCGCGCCGCCCAGGCATTGCTGGCGAGGATTAATGAC
GAGGAATGGGAAGAAGTGACGATCGCTTCGTCGTTGTGCAAGCGGGAGAGTTGCTAA

Protein sequence :
MSINKKRRSTGRVTLADVAQLAGVGSMTVSRALRTPEQVSDKLREKIEEAVSQLGYLPNQAASSLASASSNTIAMIVPSL
SEAGCAEMFAGLQKVLQPAGYQIMLAESQHRIEREEKLLETLLSYNLAAAILLSVEHSANVRQWLDNLTIPVLEIGALTN
SPIDMNIGIDYVEAMFQLTQTVVAKGYQNIGMLCANQEQWIFQQHLQGWRKAMLKAHMSPHRVINAAEPASFSTGAQQLP
EFLLAWPEIDALVCVSDDLACGALYECQRRRIKVPDELAVVGFGNADVSKVCQPPLTTIAIPHKEIGVRAAQALLARIND
EEWEEVTIASSLCKRESC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39290.1 hypothetical protein Not tested LPA Protein 2e-55 41
vpeR ADD91728.1 putative transcriptional regulatory protein VpeR Virulence PAI-I AL862 Protein 7e-57 41