Gene Information

Name : AciX9_4144 (AciX9_4144)
Accession : YP_004210242.1
Strain :
Genome accession: NC_015057
Putative virulence/resistance : Virulence
Product : FliI/YscN family ATPase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 217119 - 218423 bp
Length : 1305 bp
Strand : -
Note : TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: aba:Acid345_1649 ATPase FliI/YscN; SMART: AAA ATPase

DNA sequence :
ATGCCGACCCCTCTCGCACCCTACTTCAGCCAGCTTGAGCGCAGCAGCAGCCTGCGTTGGAGCGGTCGCGTCCTCCAGGT
CATCGGCAACCTCGTCGAGTCCGAAGGACCCTCCTGCTCCGTCGGCGACGAGTGCGAAATCATCACTCGCGAAGGCCGCT
CTTTCTCTGGCGAAGTCGTCGGTTTTCGCGGTTCCACCATGCTCACCATGACCCTGCAACTCCCCCAGGGTATTCGCTAC
GGTGATCGCATCATTGCAACTGGAAGCCGTCCCTCCATTCGCGTTGGACCTGAGCTGCTCGGCCGTGTCATCGACGGTAC
GGGTGAGCCTCTTGACTCCCTCGGCCCATACGGCTCGCGTCGTTCCATGCCTGTCGATGCAGCAGCGCCCCTCCCACTGG
ATCGTCTTCCCATTCGTAATACGCTTGGCTGCGGCGTACGTGCCATCGACGCCTTCATCACCTGCGGCCGTGGTCAGCGT
CTCGGAATCTTTGGCGGCAGTGGCGTTGGAAAAAGTACATTGCTTGGCATGATGGCCCGCGGTACGGAAGCGGATCTAAC
CGTCATGGCTCTCATCGGAGAACGCGGCCGCGAGGTGCAGGAGTTCCTTGAAGTCATCGGCGAAGAAGGTCGAAAAAAAT
CGATCCTCGTCGTCTCAACCTCTGACCAGTCGCCCCTTCTCAAGATGCGTGCGGCACTCGCTGCCACGGCCATCGCGGAG
TACTTCGCCGCCGAAGGCAAGAACGTTCTGCTCGTCGTCGATTCGCTCACTCGCTTTGCCATGGCGCAACGTGAGATTGG
TCTCGCAGCCGGGGAGCCCCCCACAAGCAAGGGTTACACGCCTTCCGTGATCAATACCCTGGCCCGTCTCGTAGAGCGCG
CGGGGAACTTCAACAAGGGAAGCATCACAGCCTTTTATACCGTCCTGATGGAAGGGGATGATCAGCAGGATCCCGTCGTA
GACACGGTTCGATCCCTGCTGGATGGCCACGTCATCCTGGATCGCAATCTTGCGCTGCAGAATCATTATCCGCCCATCTC
GGTGCTCGATAGTCTCAGTCGGCTCATGTCTTCCATCGCCGCTCCGGAGCATCTAGGTAAGGCTCGCGCGCTCCGAATCC
TGCTTGCTTCTTATAAGCGGTCGGAGGATCTCATCCGCATCGGCGCTTACCAGAAGGGCTTTGACACCGTGCTTGACCGA
GCCGTGGAAGTGCTTCCTGAGCTCAATCGATTTCTGCAGCAGACATCAGAGGAAACGCCGCGATTCGCCGCTGTCGCCAA
GCGTTTGAACGAGATGGCAAGCTGA

Protein sequence :
MPTPLAPYFSQLERSSSLRWSGRVLQVIGNLVESEGPSCSVGDECEIITREGRSFSGEVVGFRGSTMLTMTLQLPQGIRY
GDRIIATGSRPSIRVGPELLGRVIDGTGEPLDSLGPYGSRRSMPVDAAAPLPLDRLPIRNTLGCGVRAIDAFITCGRGQR
LGIFGGSGVGKSTLLGMMARGTEADLTVMALIGERGREVQEFLEVIGEEGRKKSILVVSTSDQSPLLKMRAALAATAIAE
YFAAEGKNVLLVVDSLTRFAMAQREIGLAAGEPPTSKGYTPSVINTLARLVERAGNFNKGSITAFYTVLMEGDDQQDPVV
DTVRSLLDGHVILDRNLALQNHYPPISVLDSLSRLMSSIAAPEHLGKARALRILLASYKRSEDLIRIGAYQKGFDTVLDR
AVEVLPELNRFLQQTSEETPRFAAVAKRLNEMAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-77 49
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-66 49
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-68 49
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 6e-69 49
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 4e-69 49
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 6e-70 48
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 1e-73 48
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-77 48
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 5e-77 48
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-75 48
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-75 48
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-73 48
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-73 48
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-75 47
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-75 47
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-75 47
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 4e-75 47
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 7e-75 47
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-78 47
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 6e-78 47
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 5e-78 47
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 5e-78 47
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-77 47
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 6e-63 45
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 6e-63 45
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 9e-69 45
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 4e-77 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 6e-65 44
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-65 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-64 44
escN AAC31513.1 L0034 Virulence LEE Protein 3e-70 44
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 3e-70 44
escN AAC38383.1 EscN Virulence LEE Protein 1e-70 44
escN YP_003236088.1 translocator EscN Virulence LEE Protein 3e-69 44
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 6e-70 44
escN AAK26715.1 EscN Virulence LEE Protein 4e-70 44
escN YP_003223475.1 translocator EscN Virulence LEE Protein 4e-70 44
escN AAL57542.1 EscN Virulence LEE Protein 4e-70 44
escN NP_290268.1 hypothetical protein Virulence LEE Protein 4e-70 44
escN CAC81862.1 EscN protein Virulence LEE II Protein 4e-70 44
ECs4568 NP_312595.1 EscN Virulence LEE Protein 4e-70 44
escN CAI43874.1 EscN protein Virulence LEE Protein 3e-70 44
unnamed AAL06369.1 EscN Virulence LEE Protein 9e-69 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciX9_4144 YP_004210242.1 FliI/YscN family ATPase VFG0048 Protein 2e-83 50
AciX9_4144 YP_004210242.1 FliI/YscN family ATPase VFG2144 Protein 5e-82 50
AciX9_4144 YP_004210242.1 FliI/YscN family ATPase VFG0390 Protein 9e-78 49
AciX9_4144 YP_004210242.1 FliI/YscN family ATPase VFG2499 Protein 2e-84 49
AciX9_4144 YP_004210242.1 FliI/YscN family ATPase VFG1254 Protein 5e-82 48
AciX9_4144 YP_004210242.1 FliI/YscN family ATPase VFG0192 Protein 1e-80 47
AciX9_4144 YP_004210242.1 FliI/YscN family ATPase VFG2331 Protein 2e-84 47
AciX9_4144 YP_004210242.1 FliI/YscN family ATPase VFG0515 Protein 2e-75 47
AciX9_4144 YP_004210242.1 FliI/YscN family ATPase VFG0730 Protein 7e-71 44
AciX9_4144 YP_004210242.1 FliI/YscN family ATPase VFG0812 Protein 2e-70 44
AciX9_4144 YP_004210242.1 FliI/YscN family ATPase VFG2459 Protein 1e-61 42
AciX9_4144 YP_004210242.1 FliI/YscN family ATPase VFG1778 Protein 5e-56 41