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Name : BLIF_1859 (BLIF_1859) Accession : YP_004209771.1 Strain : Bifidobacterium longum 157F Genome accession: NC_015052 Putative virulence/resistance : Virulence Product : Clp protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2178626 - 2181310 bp Length : 2685 bp Strand : - Note : - DNA sequence : ATGGAGGAATACGATATGGAACAGAAGTTCACCACTATGGCCCAGGAGGCCGTCGGCGACGCGATTCAGAGTGCGTCCGC CGCAGGAAACGCGCAGGTCGAGACCCTGCACGTCATGGATGCGCTGCTGCGCCAGGAAAACGGCGTGGCGCGCTCTCTGA TCGAGGCCGCGGGCGGGGACCCGCAGGCCATCGGCGCGGCGGTGCGCAACGCTTTGGTCGCGCTGCCGAGCGCATCCGGA TCCAGCACCTCGCAGCCACAGGCCAGCCGCCAGCTGACCGCCGCCATCGCCCAGGCTGAGAAGGAAATGCAGCAGATGGG CGACGAATACGTCTCCACCGAACATCTGCTTATCGGCATCGCGGCCAGCAAGCCGAACCAGTCGGCCGAAATCTTGGAGA AGAACGGCGTCACCGCAGCCTCCCTGCGCAAGGCCGTACCCGGCGTGCGTGGTGGCGCGAAGGTCACCAGCCCGGACGCG GAAGGCTCGTACAAGGCCCTAGAGAAGTACTCCACCGACCTGACGGCCGCCGCCAAGGAAGGCAAGCTGGACCCGGTCAT CGGACGTGACCAGGAAATCCGCCGCGTGATTCAGATCCTCTCCCGTCGTACCAAGAACAACCCGGTGCTGATTGGCGAGC CCGGCGTCGGCAAGACCGCCGTCGTGGAGGGTTTGGCCCAGCGTATCGTGGCGGGCGACGTGCCCACCACCCTGCAAGGC AAGAAGCTCATCTCCCTTGACTTGGGCTCCATGGTGGCCGGTTCGAAGTACCGTGGCGAGTTCGAGGAGCGCCTGAAGAG CGTCCTGAACGAAATCAAGAATGCGGATGGTCAGATCATCACCTTCATCGATGAGATCCACACCATCGTCGGCGCGGGTG CGGCCGAAGGCTCGATGGATGCCGGCAATATGTTGAAGCCCATGCTGGCCCGTGGCGAGCTGCGCCTGATCGGCGCGACC ACGCTGGACGAGTACCGCGAGAACATCGAGAAGGATCCGGCGCTGGAGCGTCGTTTCCAGCAGGTGTTCGTGGGTGAGCC GAGCGTGGAAGACACCATCGCCATTCTGCGTGGTCTGAAGCAGCGTTACGAGGCGCACCATAAGGTAACGATCGGCGACG ACGCGCTGGTTGCCGCCGCGACCCTCTCGAACCGTTACATTTCGGGTCGTCAGCTGCCGGACAAGGCCATCGATCTGGTC GATGAGGCGGCCGCTCACCTGCGTATGGAGCTCGACTCCTCGCCTGAGGAGATCGATGAGCTGCAGCGCAAGGTGACCCG TCTTGAAATGGAGGAAATGCAGCTCAAGAAGGCCGAGGATCCTGCGTCCAAGGAGCGTCTGGGCAAGCTGCAAGCCGAAC TTGCGGACACCCGTGAGAAGCTCAGCGGTCTCAAGGCGCGTTGGGATGCGGAACAGGCTGGCCACAACAAGGTCGGCGAC CTGCGTGCCAAGCTCGACGACCTGCGCGTGCAGGCGGATAAGTATACCCGTGAAGGCAACTTGGCGGAGGCCTCGAAGAT TCTGTACGGCGAGATTCCGTCCATTCAGAAGGAGCTTGCCGCCGCGGAGAGCGCGGATGCTGAATCTGCTGATGCCAGCG CGGCCAACCCGGCCGATGAGCCGATGGTCCCGGACCGTGTGGACGCCGACTCGGTGGCTGAGATCGTCTCCGACTGGACC GGCATTCCCGTCGGCCGCCTGATGCAGGGCGAAAACGAGAAGCTGCTGCACATGGAGGACTACCTCGGCAAGCGTGTGAT CGGCCAGAAGGAAGCCATCGCCGCCGTGTCCGACGCGGTGCGCCGTTCGCGTGCCGGCATCTCCGACCCGAACCGTCCGA CCGGATCGTTCCTGTTCCTCGGCCCCACCGGTGTGGGCAAGACCGAACTGGCCAAGGCGCTCGCCGACTTCCTGTTCGAC GACGAGAAGGCCATGGTCCGCATCGACATGTCCGAATACATGGAGAAGGCTTCGGTCTCGCGCCTGATTGGCGCGGCGCC GGGCTACGTGGGCTACGAGCAGGGCGGCCAGCTGACCGAGGCCGTGCGCCGTCGCCCGTATTCCGTGGTGCTGTTCGACG AGGTCGAGAAGGCCAACCCGGAGATCTTCGACGTGCTGCTGCAGGTACTTGACGATGGTCGCCTGACCGATGGCCAGGGA AGGACCGTGGACTTCAAGAACACGATCCTGATTATGACCTCTAACCTCGGCTCGCAGTTCCTCGTGAACGAGGACATGGA CGCCGACGCCAAGAAAAAGGCCGTGATGGACGCTGTCCACATGAACTTCAAGCCGGAGTTCCTGAACCGTCTGGATGACA TCGTCATGTTCCACCCGCTTACGCGCGAGGAGCTTGGCGGCATCGTGGATATCCAGGTGGCTGGCGTGTCCCAGCGTCTG ACCGATCGCCGCATCACGCTGGACGTCACCGACTCGGCTCGCGAATGGCTTGCCAACACCGGTTACGACCCGGCTTATGG CGCTCGTCCGCTGCGCCGCCTGGTACAGACCGAAGTGGGCGACCAGCTGGCCCGTATGCTGCTGGCCGGCAAGGTCCACG ACGGTGACACCGTGCTCGTCGACCAGACCGGCGGCGAACATCTGGAGCTCTCCGCTTGGGCGAGCGACCAGATTGTCTCC GACAATCCGGACGTGAGCGTGGACAACGTCACCGAAGACAAGTGA Protein sequence : MEEYDMEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDPQAIGAAVRNALVALPSASG SSTSQPQASRQLTAAIAQAEKEMQQMGDEYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDA EGSYKALEKYSTDLTAAAKEGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQG KKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGAT TLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYEAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLV DEAAAHLRMELDSSPEEIDELQRKVTRLEMEEMQLKKAEDPASKERLGKLQAELADTREKLSGLKARWDAEQAGHNKVGD LRAKLDDLRVQADKYTREGNLAEASKILYGEIPSIQKELAAAESADAESADASAANPADEPMVPDRVDADSVAEIVSDWT GIPVGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFD DEKAMVRIDMSEYMEKASVSRLIGAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQG RTVDFKNTILIMTSNLGSQFLVNEDMDADAKKKAVMDAVHMNFKPEFLNRLDDIVMFHPLTREELGGIVDIQVAGVSQRL TDRRITLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVGDQLARMLLAGKVHDGDTVLVDQTGGEHLELSAWASDQIVS DNPDVSVDNVTEDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-101 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BLIF_1859 | YP_004209771.1 | Clp protease | VFG2084 | Protein | 5e-109 | 42 |
