Gene Information

Name : BLIF_1856 (BLIF_1856)
Accession : YP_004209768.1
Strain : Bifidobacterium longum 157F
Genome accession: NC_015052
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 2175560 - 2176039 bp
Length : 480 bp
Strand : +
Note : -

DNA sequence :
ATGCAAATCGACATTATTGCGCCGGGGCGCGTGAAGGAGCGTTACCTTCGCGACGCCATTGACGAGTATTCCAAGCGACT
TTCGCGCTACTGCAAGCTCAACATCATTGAAGTGGCAGATGAGAAAACGCCTGACCATGCCTCCGAAGGCGTTGACCGAC
AGATCAAGGCCAGAGAAGGCGAACGCATCGCCAAGCATCTGAAGGACGGCGCGTTTGTTATTGCCCTTGCCATCAATGGC
AAGCAGCTGTCCAGTGAAGAATTGGCCGCCAAAATCAACGACCTTGGATTGCGTGGCACCAGCCATATTCAGCTGGTCAT
CGGCGGTTCAATCGGCCTTGACGACGCGATTCTGCGTCGTGCTGATTTTCTGCTGAGTTTCTCGAAGATGACGTTCCCGC
ATCAGCTTATGCGCGTGATTCTGCTGGAGCAGATCTATCGCGCTTATAAAATCAACGCTGGCGAGCCGTATCACAAGTAA

Protein sequence :
MQIDIIAPGRVKERYLRDAIDEYSKRLSRYCKLNIIEVADEKTPDHASEGVDRQIKAREGERIAKHLKDGAFVIALAING
KQLSSEELAAKINDLGLRGTSHIQLVIGGSIGLDDAILRRADFLLSFSKMTFPHQLMRVILLEQIYRAYKINAGEPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 8e-40 53
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 8e-40 53
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 8e-40 53
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 8e-40 53
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 8e-40 53
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 8e-40 53
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 8e-40 53
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 8e-40 53
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 8e-40 53
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 2e-39 53
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 8e-40 53
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 1e-39 53
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 8e-40 53
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 1e-39 53
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 2e-38 52
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 5e-37 51
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 7e-39 51
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 7e-39 51