Gene Information

Name : BLIF_1627 (BLIF_1627)
Accession : YP_004209543.1
Strain : Bifidobacterium longum 157F
Genome accession: NC_015052
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : -
Position : 1902864 - 1904213 bp
Length : 1350 bp
Strand : -
Note : -

DNA sequence :
ATGGGTCTGTGGGATGTTGACAAGATCGAGTACGTCGGCCGCGCCAAAGGACCGAAGGAAGACTTCGCCTTCCATTACTA
CGATGCCGACAAGGTCGTTGCCGGCAAGAAGATGAAGGATTGGCTGCGCTTCGGCGTTGCTTGGTGGCACACCTTCAACC
AGGAACTGGTTGATCCGTTCGGCACCGGCACCGCGCACCGCCCGTACTACAAGTACACCGATCCGATGGACCAGGCTCTG
GCCAAGGTCGACTACGCCTTCGAGCTGTTCCAGAAGCTGGGCGTCGAGTACTTCTGCTTCCACGATCGTGACATCGCCCC
CGAAGGCGACACCCTGCGCGAGACCAACGCCAACCTCGACAAGGTCGTTGACAAGATCGACGAGAATATGAAGTCCACCG
GTGTCAAGCTGCTGTGGAACACCTCCTCCCTGTTCACCAACCCGCGCTTCGTGTCCGGCGCCGCCACTTCTCCGTTCGCC
GACATCTACGCCTACGCCGGTGGCCAGCTCAAGAAGAGCTTGGAGATCGGCAAGCGCCTGGGCGCCGAGAACTACGTGTT
CTGGGGTGGCCGCGAAGGCTACGAGAACCTGTGGAACACCGAGATGAAGCGCGAGACCGACCACATCGCCAAGTTCTTCC
ACATGTGCGCAGATTACGCCAAGGAAATCGGCTTTGAGGCCCAGTTCCTGATCGAGCCGAAGCCGAAGGAGCCGACGCTG
CACCAGTACGACTTCGATGCCGCCACCGCCATCGAGTTCCTGCGCAACCACGACCTGACCGACGTCTTCAAGCTGAACTT
GGAAGGCAACCACGCCAACCTGGCCGGCCACACCTACCAGCACGAGATCCGCGTGGCCCGCGAGTCCGGCTTTCTCGGTT
CCCTCGACGCCAACCAGGGCGACAAGCTCATCGGCTGGGACATGGACGAGTTCCCGACCGATCTGTACGAGACCGTCGCC
GTCATGTGGGAAGTCCTGCAGGCCGGCTCCATCGGACCTCACGGTGGTCTGAACTTCGACGCCAAGCCGCGCCGTACCTC
CTTCTACGAGGAGGACCTGTTCCGCTCCCACATCGCCGGCATGGATGCCTACGCCGCCGGCCTGCTGGTTGCCGACAAGA
TGAACCAGGACGGCTTCATCCAGAATCTTCAGGCCGAGCGCTACAGCTCCTACGACTCCGGCATCGGCAAGGACATCGAC
GAGGGCAACGTCACCTTGGCCGACCTCGAAGCCTACAGCCTCGACAAGCCGCAGTCCGAGCTCATCGCCGCCACCAAGTC
CGATCACCTCGAGTCCGTCAAGGCCACCATCAACAACTACATCATTGATGCCCTGGCTGAGGTCGAGTGA

Protein sequence :
MGLWDVDKIEYVGRAKGPKEDFAFHYYDADKVVAGKKMKDWLRFGVAWWHTFNQELVDPFGTGTAHRPYYKYTDPMDQAL
AKVDYAFELFQKLGVEYFCFHDRDIAPEGDTLRETNANLDKVVDKIDENMKSTGVKLLWNTSSLFTNPRFVSGAATSPFA
DIYAYAGGQLKKSLEIGKRLGAENYVFWGGREGYENLWNTEMKRETDHIAKFFHMCADYAKEIGFEAQFLIEPKPKEPTL
HQYDFDAATAIEFLRNHDLTDVFKLNLEGNHANLAGHTYQHEIRVARESGFLGSLDANQGDKLIGWDMDEFPTDLYETVA
VMWEVLQAGSIGPHGGLNFDAKPRRTSFYEEDLFRSHIAGMDAYAAGLLVADKMNQDGFIQNLQAERYSSYDSGIGKDID
EGNVTLADLEAYSLDKPQSELIAATKSDHLESVKATINNYIIDALAEVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 5e-108 52
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 4e-108 52