Gene Information

Name : fliI (BSn5_20230)
Accession : YP_004207677.1
Strain : Bacillus subtilis BSn5
Genome accession: NC_014976
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 3906366 - 3907682 bp
Length : 1317 bp
Strand : +
Note : COG1157 Flagellar biosynthesis/type III secretory pathway ATPase

DNA sequence :
ATGAAGACACAGAGTCTGATAGATTGTATAGAAATGACAGACTCGTATAAACGGTACGGAAAAGTCAAGCGGGTCATCGG
CCTGATGATTGAATCAAAAGGGCCAGCAAGCTCAATTGGCGACGTGTGCCTGATTTATGCAAAAGGACAATCTGGGAAAG
TCATTAAAGCTGAGGTAGTCGGCTTCCAGGAAGAAAATATTTTGCTTATGCCTTATTTAGAGGCTGCGAGCATTGCACCT
GGCAGCATTGTAGAAGCTACTGGGGAATCACTTCGGGTTAAAGTTGGAACCGGACTGATTGGACAAGTCATCGATGCTTT
TGGAGAACCGCTTGACGGAAAACTTCTGCCGAAAGGGCTTTCGCCTGTATCGACGGAGCAATCACCGCCCAACCCGATGA
AACGGCCGCCTATCCGTGAAAAGATGGGTGTTGGAGTCAGATCAATTGACAGCTTGCTGACAGTCGGGAAAGGCCAGCGG
ATTGGAATTTTTGCAGGAAGCGGTGTCGGAAAAAGCACATTAATGGGGATGATCGCCAAGCAGACAGAGGCTGACTTAAA
CGTCATTGCACTTGTCGGAGAACGCGGACGAGAGGTTCGGGAGTTTATTGAAAAAGATCTTGGGAAAGAGGGGCTGAAAC
GATCGATTGTAGTTGTTGCCACCTCAGACCAGCCAGCATTAATGAGATTGAAAGCGGCATATACAGCGACTGCAATTGCC
GAGTATTTCCGAGATAAAGGCCAAAATGTCATGTTTATGATGGATTCTGTTACAAGGGTGGCAATGGCGCAGCGAGAGAT
TGGATTGGCTGCCGGAGAGCCTCCGACAACAAAAGGCTATACACCTTCAGTGTTCGCTATTTTACCTCGTTTACTAGAAC
GAACAGGTGCAAACGAGCATGGAACCATTACGGCATTTTATACAGTGTTGGTAGACGGGGATGACATGAATGAGCCGATT
GCCGATACCGTACGCGGAATTTTAGACGGACATATTGTGTTGGACAGGGCGCTTGCCAATAAAGGCCAGTTTCCTGCAGT
TAACGTACTAAAAAGCATCAGCAGGGTGATGTCAAACATTTCAACAAAACAGCATCTGGATGCGGCAAATAAATTCCGTG
AACTTTTATCGACATATCAAAATTCGGAAGATCTCATTAATATCGGAGCTTACAAAAGAGGATCATCCAGAGAAATTGAT
GAAGCGATACAATTTTATCCGCAGCTTATTCAATTTTTAAAGCAGGGAACAGACGAACCGGCTTTATTGGAAGAAAGCAT
TGCTGCATTAACTAGTTTGACAGGAAATGAGGAATAA

Protein sequence :
MKTQSLIDCIEMTDSYKRYGKVKRVIGLMIESKGPASSIGDVCLIYAKGQSGKVIKAEVVGFQEENILLMPYLEAASIAP
GSIVEATGESLRVKVGTGLIGQVIDAFGEPLDGKLLPKGLSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQR
IGIFAGSGVGKSTLMGMIAKQTEADLNVIALVGERGREVREFIEKDLGKEGLKRSIVVVATSDQPALMRLKAAYTATAIA
EYFRDKGQNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTGANEHGTITAFYTVLVDGDDMNEPI
ADTVRGILDGHIVLDRALANKGQFPAVNVLKSISRVMSNISTKQHLDAANKFRELLSTYQNSEDLINIGAYKRGSSREID
EAIQFYPQLIQFLKQGTDEPALLEESIAALTSLTGNEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-100 52
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 5e-100 52
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-100 51
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-100 51
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-100 51
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-100 51
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-100 51
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-96 51
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-96 51
lscN AAO18044.1 LscN Virulence TTSS locus Protein 2e-98 51
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-93 49
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-93 48
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 7e-93 48
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 6e-92 48
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 6e-92 48
escN AAC38383.1 EscN Virulence LEE Protein 3e-86 48
escN AAC31513.1 L0034 Virulence LEE Protein 1e-85 47
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-85 47
escN NP_290268.1 hypothetical protein Virulence LEE Protein 2e-85 47
ECs4568 NP_312595.1 EscN Virulence LEE Protein 2e-85 47
escN YP_003236088.1 translocator EscN Virulence LEE Protein 7e-86 47
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-84 47
escN CAI43874.1 EscN protein Virulence LEE Protein 6e-85 47
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-84 47
escN YP_003223475.1 translocator EscN Virulence LEE Protein 8e-85 47
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 4e-92 46
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 8e-80 46
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 8e-80 46
unnamed AAL06369.1 EscN Virulence LEE Protein 5e-84 46
escN AAK26715.1 EscN Virulence LEE Protein 3e-84 46
escN AAL57542.1 EscN Virulence LEE Protein 3e-84 46
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 3e-81 45
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 2e-81 45
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 6e-79 44
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 3e-80 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 6e-77 44
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 4e-79 43
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 4e-79 43
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 5e-77 43
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 1e-77 42
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-82 42
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-76 41
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-76 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_004207677.1 flagellum-specific ATP synthase VFG2144 Protein 2e-105 53
fliI YP_004207677.1 flagellum-specific ATP synthase VFG0048 Protein 9e-99 51
fliI YP_004207677.1 flagellum-specific ATP synthase VFG0192 Protein 8e-100 51
fliI YP_004207677.1 flagellum-specific ATP synthase VFG1254 Protein 3e-100 51
fliI YP_004207677.1 flagellum-specific ATP synthase VFG0390 Protein 7e-100 50
fliI YP_004207677.1 flagellum-specific ATP synthase VFG2499 Protein 1e-94 49
fliI YP_004207677.1 flagellum-specific ATP synthase VFG0515 Protein 4e-93 48
fliI YP_004207677.1 flagellum-specific ATP synthase VFG0730 Protein 2e-86 48
fliI YP_004207677.1 flagellum-specific ATP synthase VFG2331 Protein 1e-91 47
fliI YP_004207677.1 flagellum-specific ATP synthase VFG0812 Protein 7e-86 47
fliI YP_004207677.1 flagellum-specific ATP synthase VFG1008 Protein 8e-71 43
fliI YP_004207677.1 flagellum-specific ATP synthase VFG2459 Protein 1e-77 41
fliI YP_004207677.1 flagellum-specific ATP synthase VFG1778 Protein 2e-72 41