Gene Information

Name : BSn5_08105 (BSn5_08105)
Accession : YP_004205272.1
Strain : Bacillus subtilis BSn5
Genome accession: NC_014976
Putative virulence/resistance : Virulence
Product : putative UDP-sugar epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 1539408 - 1541204 bp
Length : 1797 bp
Strand : -
Note : COG1086 Predicted nucleoside-diphosphate sugar epimerases

DNA sequence :
ATGATTATTGCGCTGGATACTTACCTCGTTTTAAATTCAGTTATTGCAGGATATCAATTTTTAAAAGATTCCTATCAATT
TTATGACTCCGGAGCATTACTGCTTACCGCTGTCAGCTTGCTCCTCAGCTATCATGTGTGTGCTTTCCTGTTCAATCAGT
ATAAACAGGTGTGGACATACACCGGGCTTGGTGAGCTGATTGTCCTGCTTAAGGGCATTACGCTTTCCGCCGCTGTGACC
GGTATCATTCAGTATGCTGTGTATCACACGATGTTCTTCCGTCTGTTAACCGCGTGCTGGGTGCTTCAGCTTTTGTCTAT
TGGAGGGACCCGTATTTTATCCAGAGTATTAAACGAAAGCATCAGGAAAAAACGCTGCGCCTCGTCCCGCGCGCTGATTA
TCGGGGCGGGCTCAGGTGGGACTCTGATGGTCAGGCAGCTGCTTTCGAAAGATGAACCTGATATCATACCTGTCGCTTTT
ATTGATGACGACCAAACGAAGCATAAATTAGAAATTATGGGACTGCCCGTAATCGGCGGTAAAGAAAGTATCATGCCTGC
GGTGCAAAAGCTCAAAATTAATTATATTATTATTGCCATTCCTTCACTCCGCACCCATGAGCTTCAGGTGTTATATAAAG
AATGTGTGCGAACCGGAGTAAGCATTAAAATTATGCCTCATTTTGATGAAATGCTGCTTGGCACACGAACTGCAGGACAA
ATCAGAGATGTAAAAGCTGAGGACTTGCTCGGCAGAAAGCCGGTAACCCTCGACACTAGCGAAATTTCGAACCGCATCAA
AGGAAAAACAGTTCTCGTCACGGGAGCGGGCGGATCAATCGGCTCGGAAATCTGCCGTCAGATCAGCGCGTTTCAGCCTA
AGGAAATCATTCTGCTCGGCCATGGGGAAAACAGCATTCATTCGATTTATACAGAGCTGAACGGACGATTCGGCAAACAC
ATTGTGTTCCATACGGAAATCGCTGATGTGCAGGACCGCGATAAAATGTTTACCTTGATGAAAAAATACGAGCCGCATGT
TGTCTATCATGCAGCTGCCCATAAGCATGTGCCTTTAATGGAACACAATCCAGAAGAGGCGGTCAAAAACAATATTATCG
GAACAAAAAATGTCGCGGAAGCAGCCGATATGTCGGGAACTGAGACATTCGTGCTGATTTCATCGGACAAAGCGGTGAAC
CCAGCCAACGTAATGGGGGCGACAAAACGATTCGCAGAGATGATTATTATGAATCTTGGGAAAGTCAGCAGAACCAAATT
TGTTGCTGTTCGCTTCGGCAATGTACTCGGGAGCCGCGGCAGCGTCATTCCAATTTTCAAAAAACAGATTGAAAAAGGCG
GCCCGGTGACAGTAACACATCCGGCAATGACCCGCTATTTCATGACGATTCCCGAGGCATCAAGGCTTGTGATTCAGGCT
GGGGCACTGGCGAAAGGGCGTCAAATTTTCGTTCTCGATATGGGAGAGCCCGTAAAGATTGTGGATCTTGCCAAAAACCT
CATTCATTTGTCCGGCTACACGACTGAGCAGGTTCCAATAGAATTCACAGGCATTCGTCCGGGCGAAAAAATGTATGAAG
AATTGCTGAACAAAAATGAAGTCCATGCTGAACAAATCTTTCCAAAAATTCACATCGGTAAAGCGGTGGACGGCGATTGG
CCGGTGCTGATGCGCTTTATCGAGGATTTTCATGAGCTGCCGGAAGCCGACCTGAGAGCGAGGCTGTTTGCGGCAATCAA
TACATCAGAAGAAATGACGGCTGCCAGCGTTCATTAG

Protein sequence :
MIIALDTYLVLNSVIAGYQFLKDSYQFYDSGALLLTAVSLLLSYHVCAFLFNQYKQVWTYTGLGELIVLLKGITLSAAVT
GIIQYAVYHTMFFRLLTACWVLQLLSIGGTRILSRVLNESIRKKRCASSRALIIGAGSGGTLMVRQLLSKDEPDIIPVAF
IDDDQTKHKLEIMGLPVIGGKESIMPAVQKLKINYIIIAIPSLRTHELQVLYKECVRTGVSIKIMPHFDEMLLGTRTAGQ
IRDVKAEDLLGRKPVTLDTSEISNRIKGKTVLVTGAGGSIGSEICRQISAFQPKEIILLGHGENSIHSIYTELNGRFGKH
IVFHTEIADVQDRDKMFTLMKKYEPHVVYHAAAHKHVPLMEHNPEEAVKNNIIGTKNVAEAADMSGTETFVLISSDKAVN
PANVMGATKRFAEMIIMNLGKVSRTKFVAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRLVIQA
GALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQVPIEFTGIRPGEKMYEELLNKNEVHAEQIFPKIHIGKAVDGDW
PVLMRFIEDFHELPEADLRARLFAAINTSEEMTAASVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 5e-120 53
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 2e-118 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BSn5_08105 YP_004205272.1 putative UDP-sugar epimerase VFG1300 Protein 6e-121 53
BSn5_08105 YP_004205272.1 putative UDP-sugar epimerase VFG0029 Protein 3e-69 41