Gene Information

Name : TSC_c21260 (TSC_c21260)
Accession : YP_004203278.1
Strain : Thermus scotoductus SA-01
Genome accession: NC_014974
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2010246 - 2010899 bp
Length : 654 bp
Strand : -
Note : -

DNA sequence : 
ATGAGGGTGCTTCTGGTGGAGGACGACCCAGGGGTTCGGGAGGCCTTGGAGCTTGGGCTTTCCCTCGAGGGGCACGAGGT
CAAGGCCACGGAAAGCCCAAAGGAAGCCCTAAGCCTCCTTCCCTGGGCGGAGGTGGTGATTTTGGACGTGCTTCTGCCCG
AAAGGGATGGCTTTTCCCTGCTTAAGGATATCCGGGCTCGCTCGGAGGTGCCCGTGCTGATGCTTACCGCCTTGGATGCG
GTGGAGTGGCGGGTGAAGGGCCTCAAGGAGGGGGCGGACGACTACCTGGTCAAGCCCTATAGCCTCTCCGAGCTCCTGGC
CCGCCTCGAGGCCCTCTGGCGCCGCGCCCATAGGGGGAAGGAGGCCCCGGAAGTTTTGGCCTACAAGGACCTGAGGCTTT
ATCCCAGGCGCATGGAGGCCTTCCGGGGGGAGAGGAGGCTTTCCCTTCCCCCCAAGGCGTTCCTCCTCCTGAAGGCTTTT
CTGGAGTCCCCGGAGGAGGTGCTTTCTAAGGAGGCTTTGATGCTGAGGGTCTGGGGGGAGGAGGTGGATCCCGCCACCTT
GGAGGTGCACCTCTCCCTCTTAAGGAAGGCCCTGGGGGAGCCCAACCCCATCCAGACGGTGCGCGGCTATGGCTACCGCC
TTTTCCTCCCTTAG

Protein sequence : 
MRVLLVEDDPGVREALELGLSLEGHEVKATESPKEALSLLPWAEVVILDVLLPERDGFSLLKDIRARSEVPVLMLTALDA
VEWRVKGLKEGADDYLVKPYSLSELLARLEALWRRAHRGKEAPEVLAYKDLRLYPRRMEAFRGERRLSLPPKAFLLLKAF
LESPEEVLSKEALMLRVWGEEVDPATLEVHLSLLRKALGEPNPIQTVRGYGYRLFLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-16 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TSC_c21260 YP_004203278.1 two-component response regulator Y16952.3.orf35.gene. Protein 7e-23 42
TSC_c21260 YP_004203278.1 two-component response regulator BAC0125 Protein 5e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TSC_c21260 YP_004203278.1 two-component response regulator VFG1390 Protein 8e-25 42