Gene Information

Name : smpB (TSC_c13650)
Accession : YP_004202533.1
Strain : Thermus scotoductus SA-01
Genome accession: NC_014974
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 1314909 - 1315343 bp
Length : 435 bp
Strand : +
Note : -

DNA sequence :
ATGGCCTCCGTGCTGGAGAACCGCCGGGCACGGCACGACTACGAGATCCTGGAAACCTACGAGGCGGGGATCGTCCTGAA
GGGAACCGAGGTTAAGTCCCTCCGCGCCGGTAAGGTGGATTTCACGGGCAGCTTTGCCAAGTTTGAAAACGGCGAGCTTT
ACCTGGAAAACCTTTACATCGCTCCCTATGAAAAGGGATCCTACACCAACGTGGACCCCAGGAGAAAGCGCAAGCTTCTC
CTTCACCGCCACGAGCTCAACCGGTTAAGGGGCAGGGTGGAACAGAAGGGCCTCACCCTGGTACCCCTTAAGATCTACTT
CAACGAAAGGGGCTACGCCAAGGTGCTCCTGGGCCTAGCCCGGGGCAAAAAGGCCTATCAGAGAAAAGAAGACGACAAGA
AGCGGGCCGTGCGCCGCGCCCTGGAGGAGCTATGA

Protein sequence :
MASVLENRRARHDYEILETYEAGIVLKGTEVKSLRAGKVDFTGSFAKFENGELYLENLYIAPYEKGSYTNVDPRRKRKLL
LHRHELNRLRGRVEQKGLTLVPLKIYFNERGYAKVLLGLARGKKAYQRKEDDKKRAVRRALEEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 7e-22 52
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-21 49
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 4e-12 42