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Name : TSC_c12320 (TSC_c12320) Accession : YP_004202401.1 Strain : Thermus scotoductus SA-01 Genome accession: NC_014974 Putative virulence/resistance : Unknown Product : type I site-specific deoxyribonuclease HsdR Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 1170489 - 1173377 bp Length : 2889 bp Strand : + Note : - DNA sequence : TTGATGCACCCCGAGGGCGCCGATCTGATCCAGCGCAACCGCGCCGTGCACCGGATGCTAGTGGACGGCGTCACCGTCGA GTACCGCACCAGCGAAGGGGCGATTCGGGGCGCCCAGGCACGCGTGATAGACTTTGACGACCCGGAAAACAACGACTGGC TGGCGGTGAACCAGTTCACCGTGGTGGAGAACCGCCACAGGCGGCGGCCGGATGTCGTGCTCTTCGTGAACGGGCTTCCC CTGGCTGTCATCGAGTTCAAAAACCCTACCGACAAGAAAGCCACCATCTGGTCCGCCTATCGCCAGCTCCAAACCTACAA GGCGGAGATCCCCTCGCTCCTTGTCTACAACGAAGCCCTTGTCATCTCAGACGGGCTCGAGGCCCGCATCGGCACGCTTA CGGCCGACCGGGACCGGTTCATGCCCTGGCGCACCATAACCGGCGAAGACGTGGCGCCAGCGGAGATGCCGCAGCTCGAG GTGCTGCTGAAGGGCGTGTTCGAGAGGCGTCGCTTCCTGGAACTTGTCCGCGGCTTCGTGGTCTTTGAAGACGAAGGGGG CGGGAAGCTCGCCAAGAAGATGGCCGGCTATCACCAGTTCCATGCGGTGCGGGTGGCGGTGGAGGAGACGCTTCGCGCCG CGGCGCGGTATGAAGCCGGGCGCCAGCCGGGCGGAAAGCCGGGAGACCGCCGGATTGGCGTCGTCTGGCACACCCAGGGC TCAGGCAAAAGCCTCACGATGGTCTTCTACGCGGGCCGCATCATCCGCCATCCTCGGATGGAGAATCCGACCATCGTGGT TCTGACCGACCGCAACGACCTAGACGGCCAGCTCTTCGGCGTCTTCTCCCGCTGCCGGGAGCTTTTGGGGCAGGATCCCA TCCAGGCAGAAAGCCGCGCCCACCTTCGCGAGCTCCTCCAAGGGCGACAGTCGGGCGGCGTCATCTTCACCACCATCCAG AAGTTCCTCCCCGAAGAGAAGGGCGACCGCTACCCACAGCTCTCCGATCGCCGCAACATCGTGGTGATCGCCGACGAGGC CCACCGCAGCCAATACGACTTCATCGACGGCTTTGCCCGCCACATGCGCGATGCCTTGCCCAATGCCTCTTTCATTGGGT TCACCGGGACGCCGCTCGAGCTGGACGATCGCAACACGCGCTCAGTCTTCGGCGACTACATCTCCATCTATGACATCCAG CGCGCCGTCCTTGACGGGGCGACGGTCCCGATCTACTACGAGAGCCGGCTGGCCAAGCTCGACCTCCCGGAGGAGCTGAA GCCTAAGGTCGACGAGGAGTTCGAGGAGGTCACGGAAAGCGAGGAGGTTGAGCGCAAGGAGAGGCTCAAGACCAAGTGGG CGCAGCTGGAAGCGGTGGTCGGGGCGGAGAAGCGCCTGCGCCTGGTAGCCCAGGACATCGTAACGCACTTCGAGCAGCGC TTAGAGGCCCTGGACGGCAAGGCCATGATCGTCTGCATGAGCCGGCGCATCTGCGTGGAGCTTTACAACGAGATCGTGCG TCTCCGCCCCGCTTGGCACAACGACGGTGACGACAAGGGCGTGATCAAGGTGGTGATGACGGGCTCAGCCTCGGATCCCG TGGAATGGCAGTCGCACATCCGCAACAAGCAGCGCCGGGAGTTCCTCGCCAAGAAGCGCTTCCGCGACCCCGCCGACCCC TTCAAGCTGGTCATCGTGCGCGACATGTGGTTGACAGGCTTCGATTGTCCAAGCCTGCACACGATGTACTTGGACAAGCC GATGCGCGCCCACGGGCTCATGCAGGCCATCGCCCGGGTGAACCGGGTCTTCCGGGACAAGCCCGGGGGGCTGGTAGTCG ACTACCTGGGGCTCGCCCACGAGCTGAAAGCAGCGCTCGCGACCTACACGGAAAGCGGCGGCACGGGGCGGACCGCCATC GACCAGAGCGAAGCCGTGGCGGTGATGGAGGAGAAGTACGAGATCTGCCGCAATCTCTTCCACGGCTTCGACTGGTCCCT GTGGAAAACGGGGCGACCTGAGGAACGGCTTGCGCTGCTGCCGGCCGCCCAGGAGCACATCCTGGCCCAGGAGAACGGCA AGGAACGGTTGCTGCAAGCGGTCTCGGAGCTCTCTCGCGCGTTCGCGCTGGCGCTGCCCCACGAAAAGGCCCTCGCCATC CGCGACGATGTGGCCTTCTTCCAGGCGGTGCGGGCGGCGCTCGCCAAGCGCGCTTCGAGCGAAGAGCGCACCGAGGAAGA CCTCGACCACGCTATCCGGCAGATTGTCTCCCGCGCCCTCATGCCTGAGGGCGTGGTGGATCTCTTCGCGGCCGCTGGCC TCAAGAAACCCGACATCTCCATCCTCTCCGAGGAGTTCCTGGCCGAGGTGCGGGGGATGCCGCAGCGGAACCTCGCCGTG GAGCTGCTGCGCAAGCTCCTCGAGGGGGAGATCAAGACCCGCCGGAAAAAGAACGTGGTCCAGGCCCGCTCCTTTGCCGA AATGCTGGAGCAGGCCATCCGCCGCTATCAAAACCGGGCGGTGGAGGCCGCGCAGGTGATCGAAGAGCTCATCGCCCTCG CCAGGGAGATGCGCGAGGCGGACCGCAGGGGCCAGGCGCTGGGCCTTAGCGAAGAGGAGCTGGCCTTCTACGACGCGCTG GAGACCAACGACAGCGCCGTCAAGGTCCTGGGTGAGCCGACGCTGCGCGAGATCGCCCGCGAGCTCGTCGATACGGTCAG GCGCAACGTCACCATCGACTGGACCGAGCGCGAGAACGTCCGTGCCCACCTTCGCCGCCTTGTCAAGCGCGTGCTCAGGA AGTACGGCTACCCACCGGACAAGCAGGAGAGGGCAACGCAGACGGTGCTCGAGCAGGCGGAGGTGCTGTCCGAGCAATGG GCAGCCTAG Protein sequence : MMHPEGADLIQRNRAVHRMLVDGVTVEYRTSEGAIRGAQARVIDFDDPENNDWLAVNQFTVVENRHRRRPDVVLFVNGLP LAVIEFKNPTDKKATIWSAYRQLQTYKAEIPSLLVYNEALVISDGLEARIGTLTADRDRFMPWRTITGEDVAPAEMPQLE VLLKGVFERRRFLELVRGFVVFEDEGGGKLAKKMAGYHQFHAVRVAVEETLRAAARYEAGRQPGGKPGDRRIGVVWHTQG SGKSLTMVFYAGRIIRHPRMENPTIVVLTDRNDLDGQLFGVFSRCRELLGQDPIQAESRAHLRELLQGRQSGGVIFTTIQ KFLPEEKGDRYPQLSDRRNIVVIADEAHRSQYDFIDGFARHMRDALPNASFIGFTGTPLELDDRNTRSVFGDYISIYDIQ RAVLDGATVPIYYESRLAKLDLPEELKPKVDEEFEEVTESEEVERKERLKTKWAQLEAVVGAEKRLRLVAQDIVTHFEQR LEALDGKAMIVCMSRRICVELYNEIVRLRPAWHNDGDDKGVIKVVMTGSASDPVEWQSHIRNKQRREFLAKKRFRDPADP FKLVIVRDMWLTGFDCPSLHTMYLDKPMRAHGLMQAIARVNRVFRDKPGGLVVDYLGLAHELKAALATYTESGGTGRTAI DQSEAVAVMEEKYEICRNLFHGFDWSLWKTGRPEERLALLPAAQEHILAQENGKERLLQAVSELSRAFALALPHEKALAI RDDVAFFQAVRAALAKRASSEERTEEDLDHAIRQIVSRALMPEGVVDLFAAAGLKKPDISILSEEFLAEVRGMPQRNLAV ELLRKLLEGEIKTRRKKNVVQARSFAEMLEQAIRRYQNRAVEAAQVIEELIALAREMREADRRGQALGLSEEELAFYDAL ETNDSAVKVLGEPTLREIARELVDTVRRNVTIDWTERENVRAHLRRLVKRVLRKYGYPPDKQERATQTVLEQAEVLSEQW AA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 52 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 47 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 47 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 47 |
