Gene Information

Name : GM18_3972 (GM18_3972)
Accession : YP_004200667.1
Strain : Geobacter sp. M18
Genome accession: NC_014973
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 4656229 - 4657185 bp
Length : 957 bp
Strand : -
Note : KEGG: gem:GM21_0408 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase

DNA sequence : 
ATGGCGCTGAAAGAGCTGAGAATAGGAACCCGCGCGAGCCAGCTCGCACTCTGGCAGGCAAACTGGGTCAAATCCGAGCT
GGAAAAACGCTACCCCGATATGACCGTCACCCTGAAGAAGATCAAGACCATCGGTGACAAGATCCTCGACGTGCCTCTGG
CACAGGTGGGGGGCAAGGGTCTCTTCGTCAAGGAGATCGAGGAAGCGATGCTGCGCGGCGAGATCGACATCGCGGTGCAC
AGCATGAAGGACGTGCCGACCGAGTTCCCGGAAGGGCTCGGCCTTTACTGCATCACCGAGCGCGAAGACCCGCGCGACGC
GGTCATCTCCAGAGGAGTCAAGTTCGCCGACCTGCCGCAGGGCGCCCGCATCGGTACCTCCGCTCTCAGGCGTCAGGCCC
AGCTCCTGAAGGTCCGCCCCGACCTGGAGATGGTCATCATCCGCGGCAACGTGCAGACCCGCATGGACAAGCTGGAGACC
GAAGGGCTCGACGCGGTCATCCTGGCCGCCGCCGGCCTGAACCGCCTGGGCTTTGCCGACCAGATCACCGAGCTCCTCCC
GACCGACCTGTCGCTGCCGGCCATCGGCCAGGGCGCCCTGGGGATCGAGTGCAGCCTCTCCAACGAGGAGGTGAAGGACG
CCATCTCCTTCTTCAACCACCCCGACACCAGCCGCGCGGTGCGTGCCGAGCGCGCCCTTTTGTGGCGCTGCGAGGGGGGG
TGCCAGGTACCGATCGCAGCCTACGGCGAAGTGACCGGCGACCAGCTGAAGCTGACCGGCTTCATCGCCTCGGTGGACGG
CAAGGTTTCCGTGAAGGGTGTCGTCACCGGTCCGGCAGACGAGTGCGAAAAGCTGGGCGTGAAGCTCGCCGAGCAGCTCC
TCTCCGATGGTGGGCACGCCATCCTGGCCGAGGTTTACCAGCGTGAAGTCTCCCGGGAAAAGGAAATCCCGGTTTAA

Protein sequence : 
MALKELRIGTRASQLALWQANWVKSELEKRYPDMTVTLKKIKTIGDKILDVPLAQVGGKGLFVKEIEEAMLRGEIDIAVH
SMKDVPTEFPEGLGLYCITEREDPRDAVISRGVKFADLPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLET
EGLDAVILAAAGLNRLGFADQITELLPTDLSLPAIGQGALGIECSLSNEEVKDAISFFNHPDTSRAVRAERALLWRCEGG
CQVPIAAYGEVTGDQLKLTGFIASVDGKVSVKGVVTGPADECEKLGVKLAEQLLSDGGHAILAEVYQREVSREKEIPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-64 53
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-64 53