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Name : GM18_3962 (GM18_3962) Accession : YP_004200658.1 Strain : Geobacter sp. M18 Genome accession: NC_014973 Putative virulence/resistance : Virulence Product : RNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : - Position : 4644655 - 4646181 bp Length : 1527 bp Strand : + Note : PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: oan:Oant_4626 RNA-directed DNA polymerase DNA sequence : ATGATAATTAGCGAAATGCAGCACAAGCTCGCAACATGGGCCGCGAGCGATCCGACGCGTCAATTCACACGTCTGCTTCG GCTCATCGTAAACCGGGACTGGCTTGCTGAGGCAGCTCGAATAGTACTGGCGTCAAACGGTGCCAGGACACCGGGCATTG ACGGAATAGACAAGCACAAGATGCAAAGGGGTCTGGATGACAAATTGGACCAATTGCAGAATGACCTGTTGCAAGGGACG TATTGCCCGCAACCGGTCAAGCGAATCTATATCAAGAAAGCCAATGGCAAGCTGAGGCCCTTGGGTATCCCCACCCTGAC TGACCGCATTGTTCAACGCGCCATGCTCATGGTCATGGACCCGATCTGGGAGAGCGATTTCCATCGTTGTTCCTATGGGT TCAGACCAGAGCGCAGCGTGCATCACGCTGTTCGCACCGTGAAGATTCAGTTACAAGATGGATCGGATACGAAAGGTCGT TGGGTCATCGAAGGTGATCTGGCGAGCTATTTCGACACGGTTCATCACAAACTGCTTCTGAAATGTGTGCGGCGGCGTAT TGCGGACAATCGTTTCGTCGATCTGCTCTGGCGTATCCTCAAGGCAGGCCATGTTGACAAAGGCCTGTTCAGGGCCTCCA GTGAAGGTGTTCCCCAAGGCGGTGTTCTCTCGCCGCTGCTATCCAATATCATGCTCCATGAATTTGATATGTGGATGGAA GGGAATTACCTGAACAAAAAGGTACGTAAGGATCGCTGGGCATGGAACTTCGGCATCCAGCAGGGACGTCCCATCACCAT TCGTGAGAATCGCGAATGGAAACCTGCTGTTGCCTTCAGTCGCTTTGCCGATGACTTCGTGGTCATCGTCAAAGGGAACA AGGCGCATGCCGAGGCCATCCGTGAGCAATGCCGGATGTTCCTGGAAGGGAAGCTGAAGTTGACGCTGAATATGGAGAAA ACCCATATAACCCACGTCAATGACGGTTTTGTCTTTCTTGGACACCGGATCATACGCAAGCGGGGAAAGACAGGTCGGAT GTCAGTGGTGACGACGATACCCTATGAGAAAGCCAAGGCGTTTGCACATAAACTGTCCAAGGCTCTCTCAGGTGATCACG ATCTCAGCAAGGTCGATATGGTGGACCGCCTCAACCGCAAGCTCTCGGGTTGGGCGGCCTTTTACAAGTTCACTGACAAC ACAGCACGCACCTTCCAGCGCATTGATCGAGTAGTGTTCTGGAAGCTGGCGCACTGGCTGGCACAGAAATACCGGAGTCG TATCAAGCCATTGATGCGGAACTGGTGTCGGGCTCCTGAAAAGGGCAAGGCTAAGACCTGGGTTCTATTCGGGATCAGTG AGCAAGGAAACCGTGTCGGAAAAGCTCTGCATCGGCTGGTAGGAAGCCCAAAGATGCAGTTCAGATGGCGCAATCCGGAG ACCAACCCATACATAAAACGGGAGGAGAACCGAAGCACCATTACCTCGCGTTATCGTGACGTTGCTATGGCCATGGGCCG AGCTTAA Protein sequence : MIISEMQHKLATWAASDPTRQFTRLLRLIVNRDWLAEAARIVLASNGARTPGIDGIDKHKMQRGLDDKLDQLQNDLLQGT YCPQPVKRIYIKKANGKLRPLGIPTLTDRIVQRAMLMVMDPIWESDFHRCSYGFRPERSVHHAVRTVKIQLQDGSDTKGR WVIEGDLASYFDTVHHKLLLKCVRRRIADNRFVDLLWRILKAGHVDKGLFRASSEGVPQGGVLSPLLSNIMLHEFDMWME GNYLNKKVRKDRWAWNFGIQQGRPITIRENREWKPAVAFSRFADDFVVIVKGNKAHAEAIREQCRMFLEGKLKLTLNMEK THITHVNDGFVFLGHRIIRKRGKTGRMSVVTTIPYEKAKAFAHKLSKALSGDHDLSKVDMVDRLNRKLSGWAAFYKFTDN TARTFQRIDRVVFWKLAHWLAQKYRSRIKPLMRNWCRAPEKGKAKTWVLFGISEQGNRVGKALHRLVGSPKMQFRWRNPE TNPYIKREENRSTITSRYRDVAMAMGRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sfiA | AAB86996.1 | reverse transcriptase-like protein | Not tested | SHI-1 | Protein | 1e-139 | 68 |
| SF2976 | NP_708749.1 | reverse transcriptase-like protein | Not tested | SHI-1 | Protein | 3e-162 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GM18_3962 | YP_004200658.1 | RNA-directed DNA polymerase | VFG0639 | Protein | 1e-162 | 66 |
