Gene Information

Name : GM18_3935 (GM18_3935)
Accession : YP_004200633.1
Strain : Geobacter sp. M18
Genome accession: NC_014973
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4612806 - 4613495 bp
Length : 690 bp
Strand : +
Note : KEGG: gbm:Gbem_0437 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
GTGTTGCAACTGCGAGATGTGGTTAAGTCATACGAGGCGAAATCGACGGTGACGGCGCTCTCCGGGATCACCCTTTCCAT
CGCCTCCGGCGAGATGGTGGCCATCATGGGGCCATCCGGCTCCGGGAAATCGACCCTGCTGAACCTGATGGGGGGGCTGG
ACGTCCCGACTTCGGGCGAGGTGCTGGTGGCGGGGACGGACCTCGCCAGGCAGAGCGAGAAAGGGCGCTCGCTGTTCCGG
CGCTCCCACGTCTCGTACATCTTCCAGGCCTACCACCTGATGCCGACACTCAGGGTGCGGCAGAACGTGGCGCTGCCGCT
GCGCCTTGCCGGGCTCTCCGCCAGGGAGGCGGAGGCCAGGGTGGAGCGGGTACTGGCCGAGGTGGGGCTGGAACAGCGCG
GCGACCACCTCCCCGACGAGCTCTCGGGCGGCGAGCGCCAGCGGGTCGCCATCGCCCGCGCCCTGGTCACCGACGCGCCG
CTGCTTCTCGCGGACGAGCCGACCGGCAACCTGGACAGCGCGCGCGGGAGGGAAATCCTCGCCCTGCTCCGCTCCATCCA
CAGCCAGCGCGGCACCACCATCGTCATGGTGACCCACGACCACGACGCGGCATCCGCCTGCGACCGGCTGATCCGGCTCA
GAGACGGAAGGGTCGAGGATGACGGCGCGGCCCCCGGAGGTGGCAGATGA

Protein sequence : 
MLQLRDVVKSYEAKSTVTALSGITLSIASGEMVAIMGPSGSGKSTLLNLMGGLDVPTSGEVLVAGTDLARQSEKGRSLFR
RSHVSYIFQAYHLMPTLRVRQNVALPLRLAGLSAREAEARVERVLAEVGLEQRGDHLPDELSGGERQRVAIARALVTDAP
LLLADEPTGNLDSARGREILALLRSIHSQRGTTIVMVTHDHDAASACDRLIRLRDGRVEDDGAAPGGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-29 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-29 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-29 42
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM18_3935 YP_004200633.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-34 48
GM18_3935 YP_004200633.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-40 45
GM18_3935 YP_004200633.1 ABC transporter-like protein CP001581.1.gene598.p Protein 1e-42 43
GM18_3935 YP_004200633.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-41 43