Gene Information

Name : GM18_3908 (GM18_3908)
Accession : YP_004200606.1
Strain : Geobacter sp. M18
Genome accession: NC_014973
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 4570416 - 4571294 bp
Length : 879 bp
Strand : +
Note : KEGG: gbm:Gbem_0470 tyrosine recombinase XerC; TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein

DNA sequence :
ATGAAACGGGCCATCGAGCAATTCTGCAGCTATCTGGAGACCGAGCGAAACGTCTCGCCCCATACCCTCGCCGCCTACCG
CAGCGATCTGGAGCAGTTCGCCTCGTCCCTCTCCCGGCACGGGGAGCCCCTCCCCGAGCAGGTCGACCACCTGGCGATCC
GGCGCTACCTGGCGCAGTTGCACAAGGGGCACGCGAAGAGCTCCATCGGCAGGAAGCTCTCGGCCATCCGCGCGCTGTTC
CGGTTTCTGCTTCGGGAGGGGAGGCTGGAGAAGAACCCGGCCGAGCTGGTCAGCACCCCCAAAAAGGAAAAGCGACTCCC
CTTCCACCTGAACATCGACCAGGTGAGCGCCCTGGTCGAGGCCCCCGCCGGGGCGGCCGGGCTGCCGCTCAGGGACCGGG
CGGTCCTGGAAACGCTCTACTCCTGCGGCATCAGGGTGAGCGAGCTGACCGGCATGAACGTCGGGGACCTGGACCTCCAC
CAAGCCCTGGCGCGCGTCATGGGCAAGGGGGGGAAGGAGCGCATCGTCCCCGTCGGCTCCTTCGCCCGCAAGGCGCTCTC
CGCCTACCTGGAGGAGCGGGGCGACCCGCCCCCCTGCGATCCCCTGATCCTGAACTCCCGCGGGGGGAGGCTCACCAGGC
GGAGCGTGGCCCGCATCGTGGACAGGCACATGCTGATGATCGCAGCCATGCGCAAGGTTTCCCCCCACACCTTGCGCCAC
ACCTTCGCCACCCACCTTCTGGAAGGGGGGGCCGACCTTAGGTGCATCCAGGAACTCCTCGGTCACGCCTCCCTCTCCAC
CACCCAGAAGTACACCCAGGTCAGCATCGACAGGCTGATGGAGGTATACGACCAGGCCCACCCCAAGGCACGCACCTAA

Protein sequence :
MKRAIEQFCSYLETERNVSPHTLAAYRSDLEQFASSLSRHGEPLPEQVDHLAIRRYLAQLHKGHAKSSIGRKLSAIRALF
RFLLREGRLEKNPAELVSTPKKEKRLPFHLNIDQVSALVEAPAGAAGLPLRDRAVLETLYSCGIRVSELTGMNVGDLDLH
QALARVMGKGGKERIVPVGSFARKALSAYLEERGDPPPCDPLILNSRGGRLTRRSVARIVDRHMLMIAAMRKVSPHTLRH
TFATHLLEGGADLRCIQELLGHASLSTTQKYTQVSIDRLMEVYDQAHPKART

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-38 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-38 42