Gene Information

Name : GM18_0390 (GM18_0390)
Accession : YP_004197153.1
Strain : Geobacter sp. M18
Genome accession: NC_014973
Putative virulence/resistance : Resistance
Product : SSS sodium solute transporter superfamily protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 482497 - 484344 bp
Length : 1848 bp
Strand : +
Note : KEGG: geo:Geob_0173 SSS sodium solute transporter superfamily; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter

DNA sequence : 
ATGAGACGGTTACTTGCGGCGGCACTCTTGACACTCACCCTGGCGGCATCGGCCCACGCCGCCCTCCCGCTCCCCGCGGA
GGTGCGGACCAACCGGACCATCACCGTCTCCATGTTCCTGGTGATCGTGCTCATCACCGGCGCGGTCGTCTACCGGGCCG
CCAAGACCACCAGGACCACGGCCGACTACTACGCGGCCGGCGGCGCCATCTCCGGCCTCCAGAACGGCTGGGCCATAGCC
GGGGACTACCTCTCGGCGGCGACCTTCCTCGGCATCGCGGGGATCACCTCCATCTTCGGCGCCGACGGCTTCATGTACAC
GGTCGGCCCCTTCTTCTCCTTCGTCACCATTCTCCTGGTGATCGCGGAGCCCTGCCGCAACGTCGGGAGATACACCCTGG
GGGACATCCTGTCGCTCAGGAGCTCCTCGAAGCTGGTGCGGGGAACCGCGGCGCTCTCGGCGGTGGTGGTCTCCACCTTC
TACCTCCTGGGGCAGATGGTCGGGGCGGGGAAGCTGATGCAGCTCCTTTTGGGGATTCCCTACACCGTCGCCGTGATCGG
GGTAGGGGCGCTGATGGTGGTGTACGTCACCTTCGGCGGCATGAAGGGGACCACCTGGGTGCAGATCATCAAGGCGGCGC
TGCTGATGCTGAGCGGCGTCGCACTGACCCTGCTCCTTTTGCAGAAGTTCGGTTTCAACCTGCTCCGCTTCTATGACGCG
GTGGCGGAGAGCCCGGCGGTGCAGGACCACGTGCGCATGCTGGTAAAGGACGCGGTACCCCGGCCGGGGATGGATTACGG
CCAGAGGTTTTTGGAGAGCGGGCTTCTCCTCAAGGACCCCATCGACCAGATCTCCCTGGGGCTCGCCTTCGCCCTCGGGG
CCGCGGGGCTGCCCCACATCATGATGCGCTTCTTCACGGTCCCCGACGCGCGGGCGGCCCGGAAGAGCGTGGTGATCGCC
ATGGTGCTGATCGGGGTCTTCATGGTCATGGTCACCATGATCGGCTTCGGAGCGGCCCTCTTCATCACCCCGCAGCAGAT
CATGGCCGTGGACAAGGGGGGGAACATGGCAGCGCCGATGCTGGCCCAGTACCTGGGTGGCGGGGCGGGCACCGTCACCG
GCGACCTCCTCCTGGCCTTCGTCTGCGCCGTCGCCTTCTCCACCATCCTCGCCGTGGTCTCCGGGCTCATCCTGGCGGTC
TCGGCGGCGGTGGCGCACGACCTCTACGTGAACGTGCTGCGCGACGGCCGGCCGGACCAGAAGGAGCAGATGCTGATAGC
GAGGCTCTCCGCGCTGGCGATCGGCGCCGTCGCCATCGTGCTCGGGCTCGCCTGCGAGAAGCAGAACATCGCCCACCTCG
TGGTGCTCGCCTTCGCCGTGGTCGCCTCAAGCAACTTCCCGGTGCTCCTCTTCGCCCTGTTCTGGAAACGCTTCAACGCC
GGCGGCATCGTCACCGGCCTCACCGTGGGAGCCCTGTTCGCCATAGGCGTGGTCATGGTCTCCCCCAACATGACCTACCC
CAAGAAGATCGCCGCGGACGCCAAGAGGGTGGTCGAGGTGCTCGAGAAGAAGCAGGCGGCGGGAGTGCCGCTCGCCGAGA
AGGAGGTGAAGTCCCTGGAGAAGGCGCGCATCGACTGGGCCCGCAACAAGGAGGGCAGGTCGCTGGTCGGTCTGGACGCG
CCGCTTTTCCCGCTGAAGAACCCGGCGATCCTCTCGGTCCCGGTCGGATTCCTGGCCGCCATCGCGGGGACCCTCCTCTT
CGGTCACCGGCGCGAGGAAGAGATGTTTGACGAGCTCTATATCAGGCAGAACACCGGCCACGGTGCTGCCGAAGCCGCCG
ACCACTAG

Protein sequence : 
MRRLLAAALLTLTLAASAHAALPLPAEVRTNRTITVSMFLVIVLITGAVVYRAAKTTRTTADYYAAGGAISGLQNGWAIA
GDYLSAATFLGIAGITSIFGADGFMYTVGPFFSFVTILLVIAEPCRNVGRYTLGDILSLRSSSKLVRGTAALSAVVVSTF
YLLGQMVGAGKLMQLLLGIPYTVAVIGVGALMVVYVTFGGMKGTTWVQIIKAALLMLSGVALTLLLLQKFGFNLLRFYDA
VAESPAVQDHVRMLVKDAVPRPGMDYGQRFLESGLLLKDPIDQISLGLAFALGAAGLPHIMMRFFTVPDARAARKSVVIA
MVLIGVFMVMVTMIGFGAALFITPQQIMAVDKGGNMAAPMLAQYLGGGAGTVTGDLLLAFVCAVAFSTILAVVSGLILAV
SAAVAHDLYVNVLRDGRPDQKEQMLIARLSALAIGAVAIVLGLACEKQNIAHLVVLAFAVVASSNFPVLLFALFWKRFNA
GGIVTGLTVGALFAIGVVMVSPNMTYPKKIAADAKRVVEVLEKKQAAGVPLAEKEVKSLEKARIDWARNKEGRSLVGLDA
PLFPLKNPAILSVPVGFLAAIAGTLLFGHRREEEMFDELYIRQNTGHGAAEAADH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 3e-66 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM18_0390 YP_004197153.1 SSS sodium solute transporter superfamily protein BAC0570 Protein 4e-71 48
GM18_0390 YP_004197153.1 SSS sodium solute transporter superfamily protein BAC0564 Protein 4e-69 43