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Name : GM18_3759 (GM18_3759) Accession : YP_004200461.1 Strain : Geobacter sp. M18 Genome accession: NC_014973 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4399323 - 4400885 bp Length : 1563 bp Strand : + Note : TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: gem:GM21_0608 general secretory pathway protein E; SMART: AAA ATPase DNA sequence : ATGGCAGAAACGCTTGATATAGAGAGAATAGCGGAGCGCCTCGGCCTCCCCTTCCAGGCCGAGATCGACGATTCCAAGGT GGACGGCTCCCTGGTGAACCGGGTGCCGCTCAACTTCGCCCGCAACAACCTGCTGCTCCCCCTGCGCGAGGAGGACGGCA CGGTGATCGCCGCCAGTGCAGACCCGGCGAACCTATTGGCCGTCGACGAGATGGCGGGGCTCTTCCATCTCCCGGTCTCC ACCGTGGTGGTGCCGAAGCCTGTCCTCCTTGACGCGGTGAACCGCCTCTACTCGCGGCTCTCCGGCTCCGCCCAGGAGGT GGTCGAGGAGCTCGAAGGGGAGGAGCTCTCCACGCTCGCCACCTCCTTCAACGAGCCGCGCGACCTGATGGAGCTGACCG ACGAGGCGCCGGTGATCCGGCTTCTGAACTCGATCCTGTTCCAGGCGGTCAAGGAGCGCGCCAGCGACATCCACATCGAG CCCTTCGAGCGGGAGCTGGAGGTCCGCTTCAGGATCGACGGCCTGCTCTACAAGATGCTCTCCCCCCCCAAGGTAATCCA GGAGGCGCTCACCTCCCGCGTGAAGATCATGTCCGGGCTGAACATCGCCGAAAAGAGGCTGCCGCAGGACGGCCGCATCC GGGTGAAGGTGGCCGGCCGCGACGTCGACATCCGCGTCTCGCTGATCCCGACCTTCTTCGGCGAGCGGGTGGTCCTGAGG CTTCTGGACAAGCAGCGCGGCGTCCTCTCCCTGAAGGAGATCGGCCTCTCCGACAAGAACGACCTCCTCATGGAGCGGCT TCTCTCCCGCACCAGCGGCATCATCCTGGTCACCGGGCCGACCGGCAGCGGCAAGACCACCACGCTCTACGCGGCGCTCT CCCAGATCAACTCGCCGGAGAAGAACATCATCACGGTCGAGGACCCGATCGAATACCAGCTAAAGGGTGTGGGGCAGATC CAGGTGAACCCGAAGATCGACCTGACCTTCGCCAACGGGCTGCGCTCCATCCTCAGGCAGGACCCGGACATCGTGATGAT CGGCGAGATCCGCGACGCCGAGACCGCCGAGATCGCCATGCAGGCGTCTTTGACCGGCCACCTGGTGCTCTCCACCCTGC ACACCAACGATGCCGCCACGGCGGTCACGCGCCTGATCGACATGGGGATCGAACCGTTCATGGTCGCCTCTTCGCTCTCG GCGGTGCTGGCGCAGCGGCTGGTGCGGGTGATCTGCCCGCACTGCAAGGAATCCTACACGCCGGACCGCACTTACCCCGG CGTCGAGCTCCCGCCGGTCCTGTACCGCGGCCGCGGCTGCGAGAAATGCTTCAACCTGGGGAGCATGGGACGGATGGGGA TCTACGAGCTCCTCCCCATCGACGCCGAGCTCTGCTCCATGATCGTGCGCCAGGCCTCCTCCGGCGCCATCAAGGAGTAC GCGATCTCCAAGGGGATGCGCACTCTGCGCGAGGACGGCCTTTTGAAGGCGGCCCAGGGGATTACCACCATCGAGGAGGT CCTGAGGGTGACCCAGGACGACTATGCCGACCTTTCGCTATAG Protein sequence : MAETLDIERIAERLGLPFQAEIDDSKVDGSLVNRVPLNFARNNLLLPLREEDGTVIAASADPANLLAVDEMAGLFHLPVS TVVVPKPVLLDAVNRLYSRLSGSAQEVVEELEGEELSTLATSFNEPRDLMELTDEAPVIRLLNSILFQAVKERASDIHIE PFERELEVRFRIDGLLYKMLSPPKVIQEALTSRVKIMSGLNIAEKRLPQDGRIRVKVAGRDVDIRVSLIPTFFGERVVLR LLDKQRGVLSLKEIGLSDKNDLLMERLLSRTSGIILVTGPTGSGKTTTLYAALSQINSPEKNIITVEDPIEYQLKGVGQI QVNPKIDLTFANGLRSILRQDPDIVMIGEIRDAETAEIAMQASLTGHLVLSTLHTNDAATAVTRLIDMGIEPFMVASSLS AVLAQRLVRVICPHCKESYTPDRTYPGVELPPVLYRGRGCEKCFNLGSMGRMGIYELLPIDAELCSMIVRQASSGAIKEY AISKGMRTLREDGLLKAAQGITTIEEVLRVTQDDYADLSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-98 | 52 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-98 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GM18_3759 | YP_004200461.1 | general secretory pathway protein E | VFG0182 | Protein | 7e-110 | 58 |
| GM18_3759 | YP_004200461.1 | general secretory pathway protein E | VFG2048 | Protein | 2e-99 | 52 |
| GM18_3759 | YP_004200461.1 | general secretory pathway protein E | VFG1876 | Protein | 4e-94 | 51 |
| GM18_3759 | YP_004200461.1 | general secretory pathway protein E | VFG0233 | Protein | 6e-81 | 45 |
| GM18_3759 | YP_004200461.1 | general secretory pathway protein E | VFG2426 | Protein | 3e-75 | 43 |
