Gene Information

Name : GM18_3299 (GM18_3299)
Accession : YP_004200012.1
Strain : Geobacter sp. M18
Genome accession: NC_014973
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3881196 - 3881885 bp
Length : 690 bp
Strand : -
Note : KEGG: gem:GM21_0987 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGGCCCAAACCAGCGCACCCATCGTCCGGATCAGGGGGCTCTCCAAGGCGTACCGCCGCGGTGCCCAGCTCATTCCGGT
CCTCACCGGGATCGACTTCGACATCGCCAGAGGGGAGTTCGTCGCCCTGATGGGGCCCTCCGGTTCCGGGAAGAGCACCC
TGCTGAACCTGATCGCCGGCATCGACAGCGCCGACGAGGGATCCATCCTGATCGCCGACGTCGAGATCACCCGCCTGGGC
GAAGGTGATCTCGCCCGCTGGCGCGCCGGCAGCGTCGGGTTCATTTTCCAGTTCTACAACCTGATCCCGGTCTTGACCGC
CTTCGAGAACGTGGAGCTCCCGCTGTTGCTGACCCACCTGTCCAGGCGCGAGCGGCGCGAACACGTCGAGGCGGTGCTTA
ACGTGGTCGGCCTTGCCGACCGGATGGACCACTACCCCTCCCAGCTTTCAGGAGGGCAGCAGCAGCGCGTCGCCATCGCC
CGGGCCATCGTCACCGACCCCGAGATCCTGGTGGCCGACGAGCCGACCGGCGACCTGGACCGCGTCTCCGCCGGGGAGAT
CCTGCAGCTCATGGACCGCCTGGTGCACGAGTTCGGCAAGACGGTGATCATGGTGACCCACGACCCGCGAGCCGCCGAGA
AGGCCCATATCATACGGCACCTGGAGAAGGGCGAGTTGAGCGAGACCTAG

Protein sequence : 
MAQTSAPIVRIRGLSKAYRRGAQLIPVLTGIDFDIARGEFVALMGPSGSGKSTLLNLIAGIDSADEGSILIADVEITRLG
EGDLARWRAGSVGFIFQFYNLIPVLTAFENVELPLLLTHLSRRERREHVEAVLNVVGLADRMDHYPSQLSGGQQQRVAIA
RAIVTDPEILVADEPTGDLDRVSAGEILQLMDRLVHEFGKTVIMVTHDPRAAEKAHIIRHLEKGELSET

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-33 43
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM18_3299 YP_004200012.1 ABC transporter-like protein NC_012469.1.7686878. Protein 5e-43 48
GM18_3299 YP_004200012.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-36 44
GM18_3299 YP_004200012.1 ABC transporter-like protein NC_012469.1.7685735. Protein 1e-36 42