Gene Information

Name : GM18_3077 (GM18_3077)
Accession : YP_004199796.1
Strain : Geobacter sp. M18
Genome accession: NC_014973
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-(acyl-carrier-protein) reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 3642403 - 3643143 bp
Length : 741 bp
Strand : -
Note : KEGG: gbm:Gbem_3106 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGAGCTTGAACGGACAGGTAGCAATCGTAACGGGTGCCTCCCGCGGCATCGGCCGGGCCATCGCGGTGAAACTCGCAGC
ACAGGGCGCTGCGGTCGTGGTAACCGCCACCACCGAAAAGGGCGCCGCCAGGACCGCCGAGGAGATCGTCGCCGCCGGCG
GCAGATCGCTGGCAGTGAAGGTTGACGTATCCGTGGCCGCCGAGGTGGAAGGGCTCTTCAAGCAGGCAGTCGAGGCCTTC
GGCAAGGTCGACATCCTGGTCAACAACGCCGGGATCACCAAGGACGGCCTGCTCCTCAGGATGAAGGAGGAGGACTGGGA
CGCGGTCCTCGACGTGAACCTGAAAGGGAGCTTCAACTGCACCCGCGAGGCCGCCAAGCTGATGTCCAAGGCGCGCTACG
GCAGGATCGTCAACGTCTCCTCCGTGGTCGGCGAGATGGGGAACCCGGGCCAGGCCAACTACTGCGCCTCCAAGGCCGGC
ATGATCGGCCTCACCAAGTCGGTGGCGAGGGAACTGGCCAAAAGAAACGTCACCGTCAACGCGGTCACCCCGGGCTTCAT
CGAGACCGACATGACCGCGGAGCTCTCCGAGAAGACCAGGGAAGCCCTCCAGGAGCAGATCCCCATGGGAAGACTGGGCA
GCGCCGATGACATAGCGGGCGCCGTACTGTTCCTCGTTTCCGACGCCGCGGCATATATCACCGGGCACGTACTTTCCGTG
AATGGCGGCATGTACATGTGA

Protein sequence : 
MSLNGQVAIVTGASRGIGRAIAVKLAAQGAAVVVTATTEKGAARTAEEIVAAGGRSLAVKVDVSVAAEVEGLFKQAVEAF
GKVDILVNNAGITKDGLLLRMKEEDWDAVLDVNLKGSFNCTREAAKLMSKARYGRIVNVSSVVGEMGNPGQANYCASKAG
MIGLTKSVARELAKRNVTVNAVTPGFIETDMTAELSEKTREALQEQIPMGRLGSADDIAGAVLFLVSDAAAYITGHVLSV
NGGMYM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 1e-31 43
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 3e-32 43
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-31 43
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 2e-31 43
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 1e-31 43