Gene Information

Name : GM18_3048 (GM18_3048)
Accession : YP_004199767.1
Strain : Geobacter sp. M18
Genome accession: NC_014973
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 3609345 - 3610757 bp
Length : 1413 bp
Strand : -
Note : KEGG: gbm:Gbem_3077 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp

DNA sequence :
ATGACACCAAAACAAGTTGTGGAGTTTGCCAAAGAAAACGGCGTGCTGATGGTCGATTTCAAATTCATGGACTTCGTCGG
CATCTGGCAGCACTTCACCGTGCCGATGAGTGAGTTCGGCGAGGACACCTTCGAGGAAGGCCAGGGCTTCGACGGCTCCT
CCATCCGTGGCTGGCAGCCGATTCACGCTTCTGACATGATCATCATTCCGGACCCGAAGACCGCGAAGCTGGACCCGTTC
ACCGCGATCCCGACCCTCTCGCTTATCTGCGACATCTTCGACCCGATCACCAAGGAAGACTACAGCCGCGACCCGCGTAA
CATCGCGAAGAAAGCCGAGAACTACCTGAAGTCGACCGGCCTCGCCGACACCGCTTACTTCGGACCGGAAGCAGAGTTCT
TCATCTTCGACGACGTCCGTTACGATTCCACCGCCAACTCCTCCTTCTACGCAGTTGACTCCGTGGAAGGCGCCTGGAAC
ACCGGCCGCGAAGAGTTCCCGAACCTCGGCTACAAGCCGCGCCACAAGGAAGGCTACTTCCCGGTTGCCCCGACCGACTC
CCAGAACGATCTGCGTAACGAGATGGTGATGGAACTCCAGAAGGTCGGCATCCGCGTCGAGTGCCAGCACCACGAAGTCG
CCACCGGCGGCCAGGCAGAGATCGACATGCGCTTCTCCTCGCTGGTCGACATGGCCGACCAGCTCCAGTGGTTCAAGTAC
GTCATCAAGAACGTCGCCAACCGCAACGGCAAGACCGTCACCTTCATGCCGAAGCCGCTCTACGGCGACAACGGTTCCGG
TATGCACTGCCACCAGTCCCTGTGGAAAGACGGCACCAACCTCTTCGCCGGCGACAAATACGGCGGGCTCTCCCAGATGG
CTCTCTACTACATCGGCGGCATCATCAAGCACGCCCGTGCCCTGTGCGCCTTCACCAACCCGACCACCAACTCCTACAAG
CGTCTGGTGCCGGGCTTCGAAGCTCCGGTGAACATGGCTTACTCCAGCCGTAACCGTTCCGCTTCCCTGCGCATCCCGAT
GTTCTCCTCCAACCCGAAGGCGAAGAGGATCGAGTACCGTACTCCGGACCCGTCCTGCAACGGCTACCTTGCCTTCGCAG
CGATGCTGATGGCAGGCCTCGACGGCGTCGAGAACAAGATCGATCCGGGCCAGCCGCTGGACAAGGATATCTACGGTCTG
TCTCCGGAGGAGCTGTCCAACATCCCGTCCGCTCCGGGCAGCCTCGAGGAAGCACTCAACGCCCTCAAGGAAGACCACGA
GTTCCTGCTCAAGGGCGACGTCTTCACCCCGGACGTCATCGAGAAGTGGATCGAGTACAAAACCGAAGCCGAAGTCAACC
CGGTCCGTATGCGCCCGGTACCGCTCGAGTTCGCTCTGTACTTCGACATCTAA

Protein sequence :
MTPKQVVEFAKENGVLMVDFKFMDFVGIWQHFTVPMSEFGEDTFEEGQGFDGSSIRGWQPIHASDMIIIPDPKTAKLDPF
TAIPTLSLICDIFDPITKEDYSRDPRNIAKKAENYLKSTGLADTAYFGPEAEFFIFDDVRYDSTANSSFYAVDSVEGAWN
TGREEFPNLGYKPRHKEGYFPVAPTDSQNDLRNEMVMELQKVGIRVECQHHEVATGGQAEIDMRFSSLVDMADQLQWFKY
VIKNVANRNGKTVTFMPKPLYGDNGSGMHCHQSLWKDGTNLFAGDKYGGLSQMALYYIGGIIKHARALCAFTNPTTNSYK
RLVPGFEAPVNMAYSSRNRSASLRIPMFSSNPKAKRIEYRTPDPSCNGYLAFAAMLMAGLDGVENKIDPGQPLDKDIYGL
SPEELSNIPSAPGSLEEALNALKEDHEFLLKGDVFTPDVIEKWIEYKTEAEVNPVRMRPVPLEFALYFDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-102 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM18_3048 YP_004199767.1 glutamine synthetase VFG1399 Protein 5e-134 60