Gene Information

Name : GM18_2924 (GM18_2924)
Accession : YP_004199644.1
Strain : Geobacter sp. M18
Genome accession: NC_014973
Putative virulence/resistance : Virulence
Product : N-6 DNA methylase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 3489127 - 3491259 bp
Length : 2133 bp
Strand : -
Note : PFAM: N-6 DNA methylase; KEGG: dde:Dde_1861 type I restriction-modification system specificity subunit

DNA sequence :
ATGAACCATGTGATCCACAACAGCATCGTGAATTTTATCTGGGGTATCGCCGACGACGTGCTGCGCGATGTTTATGTGCG
CGGCAAGTACCGTGACGTGATCCTGCCGATGACGGTCATCCGCCGCCTCGATGCGCTCTTGGAGCCGAGCAAGGAAAAAG
TCCTCGGCATGAAGAAGCAGCTCGACGGGGCCGGGATCGCCAACCAGCACGCCGCCCTCTGCCAGGCCGCAGGCGAGGCC
TTTTACAACGTCTCGCCCTTTACCCTGCGCGACCTGAAGAACCGCGCCAAGCAGCAACAGCTCAAGGCCGATTTCGAGGC
TTATCTGGACGGCTTTTCACCCAACGTCCAGGAGATCCTCGACAAGTTCAAGTTTCGCAACCAGATCCCCACGTTGATCG
AGGCCGACATCCTCGGCCACCTGATCGAGAAATTCCTCGACGGCCGCGTCAATCTCAGCCCCAAACCGGTTCAGGACGTG
GACGGCAACGAGATCCTTCCGGCGCTCGACAACCACTCCATGGGCACCATCTTCGAGGAGCTGATCCGCCGCTTCAACGA
GGAGAACAACGAAGAGGCCGGAGAGCACTTCACGCCCCGCGATGTGGTCAAGCTCATGGCCGACCTGATCTTCCTGCCGG
TGGCCGACGACATCGAATCGGGCACCTACCTTGTTTACGACGGGGCCTGCGGCACCGGCGGCATGCTGACCGTGGCGGAA
GAGCGTCTGGCCGAGTTGGCCGAAAGCCACGGCAAGGATGTCTCCATCCACCTGTTCGGCCAGGAGGTGCAGCCGGAAAC
CTACGCCATCTCCAAGGCCGACCTGCTGCTCAAAGGCGAAGGGGCCGAGGCCGAGAACATGAAGTACGGCTCCACGCTCT
CCAGCGATGCCTTCCCTTCGCAGGAGTTCGACTTCATGCTCTCCAATCCGCCTTACGGTAAGAGCTGGAAAACCGACCTG
GAGCGCCTGGGCGGCAAGGGGGACATCAAGGACCCGCGCTTCGTCACCCAGCACGGCGGCGACCCGGAATACAAGATGAT
CACCCGCTCCTCGGACGGGCAGCTCATGTTCCTGGTCAACAAGCTCTCCAAGATGAAGCACACCACCCGCCTCGGCAGTC
GCATCGCCGAGGTCCACAACGGCTCGTCACTCTTCACCGGCGACGCCGGTCAGGGCGAGAGCAACATCCGTCGCTGGATC
ATCGAGAACGACTGGCTGGAGGCCATTATCGCCCTGCCGGAGAACATGTTCTACAACACCGGCATCGCCACCTACATCTG
GGTACTGACCAACCGCAAGTCTGATACGCGCCGGGGCAAGGTCCAGCTCATCGACGCCACCGAATGGTACGTGCCGCTGC
GCCGCAACCTCGGCAAGAAGAACTGCGAGTTCTCCGAAGAACACATCCGCGCCATCTGCGACTTGGTGGTGAATCCGGTC
GAAACTGATAAATCCAAGATCTTCCCCAACGAGGCCTTCGGCTACTGGAAGGTGACGGTGGACCGCCCGCTGCGCCTCGC
CGTTGACCTGAGCCCGGCCCGGCTGGAACGGTTCGAGCGGGCCTGCGCCAAGGCCAAGGAAGAGCCGCTGGCCAACCTGG
CCAGTCGCGTGGCCGAAGCCCTCGGAGTCGGTCCGCACCTGGATTTCAACGCCTTCATGAACGCTGTTGAGGCCGATGCC
GACAAGCACGGCGTCAAGCTCACCGCCAAGCGCAAGAAGCTGCTGCAAAGCGACCTCTGCGACACCCGCGAGGACGCCGC
GCCGGTACTGAAGAAGGTTCACAAGCCGGGCAAGGCCACGCCCGACCCCATCCACGGCCTGGTCGAAGCCGAGGTGAACG
GTAAGACCTGCGTGGTCGAATACGAGCCGGATACCGCCCTGCGCGACACCGAACAGGTTCCGCTGCTGGAAGAAGGCGGC
ATCGAGGCCTTCATCCGGCGCGAAGTGCTGCCCTACACCCCGGATGCCTGGATCGACCCGGACAAGACTTTGGTGGGTTA
CGAGATTTCCTTTACCCGTCATTTCTACCGGCCAGCGCCCATGCGCACCTTGGATGAGATCAAGGCCGACATCTACGCCC
TGGAGCAGGAGACTGAAGGGCTGCTGGAACAGATTGTCGGGGAGGCGGAATGA

Protein sequence :
MNHVIHNSIVNFIWGIADDVLRDVYVRGKYRDVILPMTVIRRLDALLEPSKEKVLGMKKQLDGAGIANQHAALCQAAGEA
FYNVSPFTLRDLKNRAKQQQLKADFEAYLDGFSPNVQEILDKFKFRNQIPTLIEADILGHLIEKFLDGRVNLSPKPVQDV
DGNEILPALDNHSMGTIFEELIRRFNEENNEEAGEHFTPRDVVKLMADLIFLPVADDIESGTYLVYDGACGTGGMLTVAE
ERLAELAESHGKDVSIHLFGQEVQPETYAISKADLLLKGEGAEAENMKYGSTLSSDAFPSQEFDFMLSNPPYGKSWKTDL
ERLGGKGDIKDPRFVTQHGGDPEYKMITRSSDGQLMFLVNKLSKMKHTTRLGSRIAEVHNGSSLFTGDAGQGESNIRRWI
IENDWLEAIIALPENMFYNTGIATYIWVLTNRKSDTRRGKVQLIDATEWYVPLRRNLGKKNCEFSEEHIRAICDLVVNPV
ETDKSKIFPNEAFGYWKVTVDRPLRLAVDLSPARLERFERACAKAKEEPLANLASRVAEALGVGPHLDFNAFMNAVEADA
DKHGVKLTAKRKKLLQSDLCDTREDAAPVLKKVHKPGKATPDPIHGLVEAEVNGKTCVVEYEPDTALRDTEQVPLLEEGG
IEAFIRREVLPYTPDAWIDPDKTLVGYEISFTRHFYRPAPMRTLDEIKADIYALEQETEGLLEQIVGEAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1769 NP_231404.1 DNA methylase HsdM Not tested VPI-2 Protein 1e-119 48
VC0395_A1367 YP_001217310.1 DNA methylase HsdM Not tested VPI-2 Protein 1e-119 48
VPI2_0017c ACA01834.1 DNA methylase HsdM Not tested VPI-2 Protein 1e-119 48
SAS0027 YP_042160.1 type I restriction enzyme methylase Not tested SCC476 Protein 4e-82 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM18_2924 YP_004199644.1 N-6 DNA methylase VFG1102 Protein 4e-120 48