|
Name : GM18_2924 (GM18_2924) Accession : YP_004199644.1 Strain : Geobacter sp. M18 Genome accession: NC_014973 Putative virulence/resistance : Virulence Product : N-6 DNA methylase Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 3489127 - 3491259 bp Length : 2133 bp Strand : - Note : PFAM: N-6 DNA methylase; KEGG: dde:Dde_1861 type I restriction-modification system specificity subunit DNA sequence : ATGAACCATGTGATCCACAACAGCATCGTGAATTTTATCTGGGGTATCGCCGACGACGTGCTGCGCGATGTTTATGTGCG CGGCAAGTACCGTGACGTGATCCTGCCGATGACGGTCATCCGCCGCCTCGATGCGCTCTTGGAGCCGAGCAAGGAAAAAG TCCTCGGCATGAAGAAGCAGCTCGACGGGGCCGGGATCGCCAACCAGCACGCCGCCCTCTGCCAGGCCGCAGGCGAGGCC TTTTACAACGTCTCGCCCTTTACCCTGCGCGACCTGAAGAACCGCGCCAAGCAGCAACAGCTCAAGGCCGATTTCGAGGC TTATCTGGACGGCTTTTCACCCAACGTCCAGGAGATCCTCGACAAGTTCAAGTTTCGCAACCAGATCCCCACGTTGATCG AGGCCGACATCCTCGGCCACCTGATCGAGAAATTCCTCGACGGCCGCGTCAATCTCAGCCCCAAACCGGTTCAGGACGTG GACGGCAACGAGATCCTTCCGGCGCTCGACAACCACTCCATGGGCACCATCTTCGAGGAGCTGATCCGCCGCTTCAACGA GGAGAACAACGAAGAGGCCGGAGAGCACTTCACGCCCCGCGATGTGGTCAAGCTCATGGCCGACCTGATCTTCCTGCCGG TGGCCGACGACATCGAATCGGGCACCTACCTTGTTTACGACGGGGCCTGCGGCACCGGCGGCATGCTGACCGTGGCGGAA GAGCGTCTGGCCGAGTTGGCCGAAAGCCACGGCAAGGATGTCTCCATCCACCTGTTCGGCCAGGAGGTGCAGCCGGAAAC CTACGCCATCTCCAAGGCCGACCTGCTGCTCAAAGGCGAAGGGGCCGAGGCCGAGAACATGAAGTACGGCTCCACGCTCT CCAGCGATGCCTTCCCTTCGCAGGAGTTCGACTTCATGCTCTCCAATCCGCCTTACGGTAAGAGCTGGAAAACCGACCTG GAGCGCCTGGGCGGCAAGGGGGACATCAAGGACCCGCGCTTCGTCACCCAGCACGGCGGCGACCCGGAATACAAGATGAT CACCCGCTCCTCGGACGGGCAGCTCATGTTCCTGGTCAACAAGCTCTCCAAGATGAAGCACACCACCCGCCTCGGCAGTC GCATCGCCGAGGTCCACAACGGCTCGTCACTCTTCACCGGCGACGCCGGTCAGGGCGAGAGCAACATCCGTCGCTGGATC ATCGAGAACGACTGGCTGGAGGCCATTATCGCCCTGCCGGAGAACATGTTCTACAACACCGGCATCGCCACCTACATCTG GGTACTGACCAACCGCAAGTCTGATACGCGCCGGGGCAAGGTCCAGCTCATCGACGCCACCGAATGGTACGTGCCGCTGC GCCGCAACCTCGGCAAGAAGAACTGCGAGTTCTCCGAAGAACACATCCGCGCCATCTGCGACTTGGTGGTGAATCCGGTC GAAACTGATAAATCCAAGATCTTCCCCAACGAGGCCTTCGGCTACTGGAAGGTGACGGTGGACCGCCCGCTGCGCCTCGC CGTTGACCTGAGCCCGGCCCGGCTGGAACGGTTCGAGCGGGCCTGCGCCAAGGCCAAGGAAGAGCCGCTGGCCAACCTGG CCAGTCGCGTGGCCGAAGCCCTCGGAGTCGGTCCGCACCTGGATTTCAACGCCTTCATGAACGCTGTTGAGGCCGATGCC GACAAGCACGGCGTCAAGCTCACCGCCAAGCGCAAGAAGCTGCTGCAAAGCGACCTCTGCGACACCCGCGAGGACGCCGC GCCGGTACTGAAGAAGGTTCACAAGCCGGGCAAGGCCACGCCCGACCCCATCCACGGCCTGGTCGAAGCCGAGGTGAACG GTAAGACCTGCGTGGTCGAATACGAGCCGGATACCGCCCTGCGCGACACCGAACAGGTTCCGCTGCTGGAAGAAGGCGGC ATCGAGGCCTTCATCCGGCGCGAAGTGCTGCCCTACACCCCGGATGCCTGGATCGACCCGGACAAGACTTTGGTGGGTTA CGAGATTTCCTTTACCCGTCATTTCTACCGGCCAGCGCCCATGCGCACCTTGGATGAGATCAAGGCCGACATCTACGCCC TGGAGCAGGAGACTGAAGGGCTGCTGGAACAGATTGTCGGGGAGGCGGAATGA Protein sequence : MNHVIHNSIVNFIWGIADDVLRDVYVRGKYRDVILPMTVIRRLDALLEPSKEKVLGMKKQLDGAGIANQHAALCQAAGEA FYNVSPFTLRDLKNRAKQQQLKADFEAYLDGFSPNVQEILDKFKFRNQIPTLIEADILGHLIEKFLDGRVNLSPKPVQDV DGNEILPALDNHSMGTIFEELIRRFNEENNEEAGEHFTPRDVVKLMADLIFLPVADDIESGTYLVYDGACGTGGMLTVAE ERLAELAESHGKDVSIHLFGQEVQPETYAISKADLLLKGEGAEAENMKYGSTLSSDAFPSQEFDFMLSNPPYGKSWKTDL ERLGGKGDIKDPRFVTQHGGDPEYKMITRSSDGQLMFLVNKLSKMKHTTRLGSRIAEVHNGSSLFTGDAGQGESNIRRWI IENDWLEAIIALPENMFYNTGIATYIWVLTNRKSDTRRGKVQLIDATEWYVPLRRNLGKKNCEFSEEHIRAICDLVVNPV ETDKSKIFPNEAFGYWKVTVDRPLRLAVDLSPARLERFERACAKAKEEPLANLASRVAEALGVGPHLDFNAFMNAVEADA DKHGVKLTAKRKKLLQSDLCDTREDAAPVLKKVHKPGKATPDPIHGLVEAEVNGKTCVVEYEPDTALRDTEQVPLLEEGG IEAFIRREVLPYTPDAWIDPDKTLVGYEISFTRHFYRPAPMRTLDEIKADIYALEQETEGLLEQIVGEAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VPI2_0017c | ACA01834.1 | DNA methylase HsdM | Not tested | VPI-2 | Protein | 1e-119 | 48 |
| VC1769 | NP_231404.1 | DNA methylase HsdM | Not tested | VPI-2 | Protein | 1e-119 | 48 |
| VC0395_A1367 | YP_001217310.1 | DNA methylase HsdM | Not tested | VPI-2 | Protein | 1e-119 | 48 |
| SAS0027 | YP_042160.1 | type I restriction enzyme methylase | Not tested | SCC476 | Protein | 4e-82 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GM18_2924 | YP_004199644.1 | N-6 DNA methylase | VFG1102 | Protein | 4e-120 | 48 |
