Gene Information

Name : GM18_2019 (GM18_2019)
Accession : YP_004198758.1
Strain : Geobacter sp. M18
Genome accession: NC_014973
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2420792 - 2421496 bp
Length : 705 bp
Strand : +
Note : KEGG: gbm:Gbem_2210 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGGCAGAACCGATTGTCGAACTGAAGGGTATTGGCAAGAGCTTTCCGGAGGGTGACCGGGAGCGGGTGGTGTTCCGCGA
TGCCTGCCTCTCGATCGAGTCGGGCGCCTGGGTCTTTCTGCTCGGGCGCAGCGGTTGCGGCAAATCCACCCTGTTGAACC
TGGTCAGCGGCATCGACCTTCCCGATCAGGGCGAGGTCATGGTGGACGGACATGCGTTGAACCGCATGAGCGAGCGGGAG
CGCACCCTGTTCCGCCGCAACCACATCGGCTTCGTCTTCCAGTTCTACAACCTGATCCCCACCCTGACCGTCGCAGAGAA
CGTCCTCCTCCCGCTGGAACTCACCGGGCTCCTCACCCCTGAACATCGCCGGCGCGCACGCGACCTGCTGGATGCCGTAG
GCCTTGGCGACCGCGGTCAGGCCTTCCCCGACCGGCTGTCGGGAGGGGAGCAGCAGCGGGTTGCCGTGGCCAGGGCCCTG
GTGCACGCGCCGAAACTGGTGCTTGCCGATGAGCCGACCGGGAACCTGGACGCCGATACGGGCCGCCAGGTGCTCGATCT
CTTCCAGCGCCTGCTCCGTCCTTCAGGCAGCACGCTGGTGCTGGTGACCCACAGCAGCGAAGTGGCGGCCCTGGCGGACC
GGGTGTTCACCATTCAAAACGGCGCCCTGGTCGACGCCGCCGACGGGCCCGGTGCCAGGCCATGA

Protein sequence : 
MAEPIVELKGIGKSFPEGDRERVVFRDACLSIESGAWVFLLGRSGCGKSTLLNLVSGIDLPDQGEVMVDGHALNRMSERE
RTLFRRNHIGFVFQFYNLIPTLTVAENVLLPLELTGLLTPEHRRRARDLLDAVGLGDRGQAFPDRLSGGEQQRVAVARAL
VHAPKLVLADEPTGNLDADTGRQVLDLFQRLLRPSGSTLVLVTHSSEVAALADRVFTIQNGALVDAADGPGARP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM18_2019 YP_004198758.1 ABC transporter-like protein NC_012469.1.7685735. Protein 2e-40 46
GM18_2019 YP_004198758.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-32 46
GM18_2019 YP_004198758.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-33 44