Gene Information

Name : GM18_2010 (GM18_2010)
Accession : YP_004198749.1
Strain : Geobacter sp. M18
Genome accession: NC_014973
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 2408821 - 2409966 bp
Length : 1146 bp
Strand : -
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gbm:Gbem_2218 Cys/Met metabolism pyridoxal-phosphate-dependent protein

DNA sequence : 
ATGAACATCGCAACCACTGCAGCACAAATAGGCCTTGAGCGCGAGACCAGGACCGGCGCGGTCACCGTCCCCATCTACCA
GACCGCAACCTTCCGGCATCCGGGGCTGGGGCAGAGCACCGGCTACGACTACAGCCGCTCCGGCAACCCCACCCGTCAGG
CGCTTGAGGAAGGGATGGCCAGACTCGAGGGGGGGAGCCGCGGCTTCGCTTACGCCTCCGGGATGGCCGCCATAACCAGC
CTCATGTTCCTCTTCCAGCAGGGGGACCACCTGGTCGTCACCGAAGACCTCTACGGCGGGAGCTACCGGCTCTTCGAGAA
ACTGTTCCAGCAGTTCGGGTTGAGCTTCAGCTACGTGGACACGAGCGACGTCGAACTGGTGCGGCAGGCGATCCGTCCCA
ACACGCGCGCGCTCTTCGTGGAGTCGCTCACCAATCCGCTTTTGAAGGTCGCCGACGTGGAACGGCTCGCGGCACTTTGC
AAGGCAAACGACATGCTCTGCATCGTGGACAACACCTTCCTGACCCCGTACCTGTTGCGCTGTCTGGACCTGGGCGCCGA
CATCACCATCTACTCGGGAAGCAAGTACCTGGCCGGGCACAACGACACCGTCTGCGGCCTGGTCGCGGTGCAGGACCCCG
CCCTGGCGGAAAAGGTCTACTTCCACCAAAACGGCGCAGGCGCCGTGCTCGGCCCCCAGGACTCCTGGCTCACCATCCGC
GGCATGAAGACGCTGACCATCCGCATGGACCGCCAGCAGGAAAACGCCCTGGCGCTGGCCCGGTGGCTCAAGAGTCACCC
GAAGGTGGGGAAGGTCTACTACCCGGGACTTCCCGATCATCCGGGTCACGAACTGATGAAGAGCCAGTGCAGGGGCTTCG
GCGCCATGATCGCCTTCGAGGTCGCCGAGCCCGCGCTGGTGAACCAGCTGCTCATGAAGACGCAGCTTATTTCGTTTGCC
GAGAGCCTGGGGGGGGTCGAGAGCCTGATCACCTTCCCGCAGGTGCAGACCCACGCCGACATCGAGCCCGAGAAGCTGCA
GCGGCTCGGGATCAACCACCTGCTGCTCCGCCTTTCGGTGGGGATCGAAGACAAGGACGACCTGATCGCCGACCTGGCGC
AGGCATTTGAAGGAGAGTGCACATGA

Protein sequence : 
MNIATTAAQIGLERETRTGAVTVPIYQTATFRHPGLGQSTGYDYSRSGNPTRQALEEGMARLEGGSRGFAYASGMAAITS
LMFLFQQGDHLVVTEDLYGGSYRLFEKLFQQFGLSFSYVDTSDVELVRQAIRPNTRALFVESLTNPLLKVADVERLAALC
KANDMLCIVDNTFLTPYLLRCLDLGADITIYSGSKYLAGHNDTVCGLVAVQDPALAEKVYFHQNGAGAVLGPQDSWLTIR
GMKTLTIRMDRQQENALALARWLKSHPKVGKVYYPGLPDHPGHELMKSQCRGFGAMIAFEVAEPALVNQLLMKTQLISFA
ESLGGVESLITFPQVQTHADIEPEKLQRLGINHLLLRLSVGIEDKDDLIADLAQAFEGECT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 8e-84 46
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 8e-85 46
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 5e-61 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM18_2010 YP_004198749.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 4e-54 41