Gene Information

Name : GM18_2009 (GM18_2009)
Accession : YP_004198748.1
Strain : Geobacter sp. M18
Genome accession: NC_014973
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 2407688 - 2408824 bp
Length : 1137 bp
Strand : -
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gbm:Gbem_2219 Cys/Met metabolism pyridoxal-phosphate-dependent protein

DNA sequence : 
ATGAAATTCGCAACCGAACTGATCCACGGCGGCAGCCCGATCGATCCCGAACACGGCTCGGTGAGCCACCCCATTTACCT
CTCCTCCACCTTCGCGCAGCGCTCCATGGACCACTTCGGCCGCTACGACTACGCCCGTTCCGGCAACCCGACCCGCGAGG
CGCTGGAAGAGGCGGTCGCCGGGCTGGAGAAGGGAGCCACCGGTCTCGCCTTCGCCTCGGGGATGGCGGCCATCGCCTCG
ACCCTGCTCCTGTTCAGGCCGGGCGACCACCTGGTGGTCTGCGAGGACGTCTACGGCGGGACCTTCCGGCTCCTCTCCAC
CCTCTTCAAGGGATGGGGTCTGGAGGCGAGCTTTGTGGACGCCACCGACACGGCAGCCATCACCGCGGCGGTCCGCCCCG
AGACCAAGGCGCTCTACCTGGAGACGCCGTCCAACCCGCTGATCAAGATCACCGACCTTCCGGCCGCGGTAGCCCTGGCC
AGGGAGAAGGGGATTCTCACCATCGTGGACAACACCTTCATGACGCCGTACCTGCAGCGCCCGCTGGAGCTTGGCTGCGA
CATCGTGCTGCACAGCGGCACCAAGTTCCTGAACGGCCACTCCGACGTGATCTGCGGCTTCGCAGTCGCGAAGGAGCCGG
AACTCGGCCAGAGGCTGCGCTACATCCAGAACGCCTTCGGCGCCGTGCTCGGGCCGCAGGACTGCTGGCTGGTGCTGCGC
GGCCTGAAAACCCTCAAGGTACGCATGGAGGAACACCAGGCAAGTGCACGAAAAATAGTCGCCTGGCTCACCGGGCAGAA
AGAGGTGGCGCGGGTCTACTACCCCGGCCTCCCCGATCACCCCGGGTTCGAGGTCCACAACAGGCAGGCGAGCGGTCCGG
GAGCCGTACTCTCCTTCGAGCTCGCCAGCTACGAAGTCACCAAGCGCCTTTTGGAGGGGGTGAAGCTTGCCGCCTTCGCG
GTCAGCCTGGGGGGTGTCGAGAGTATCCTCTCCTACCCGGCCAAGATGTCGCATGCGGCCATGCCCCCCGCCGAGCGCGA
GGCCCGCGGCATCAAGGACACCCTGGTGCGCCTCTCGGTAGGGCTCGAGGACCCGGACGACCTGATCGCGGACATGGCCA
GGTTCCTCGACGTCTGA

Protein sequence : 
MKFATELIHGGSPIDPEHGSVSHPIYLSSTFAQRSMDHFGRYDYARSGNPTREALEEAVAGLEKGATGLAFASGMAAIAS
TLLLFRPGDHLVVCEDVYGGTFRLLSTLFKGWGLEASFVDATDTAAITAAVRPETKALYLETPSNPLIKITDLPAAVALA
REKGILTIVDNTFMTPYLQRPLELGCDIVLHSGTKFLNGHSDVICGFAVAKEPELGQRLRYIQNAFGAVLGPQDCWLVLR
GLKTLKVRMEEHQASARKIVAWLTGQKEVARVYYPGLPDHPGFEVHNRQASGPGAVLSFELASYEVTKRLLEGVKLAAFA
VSLGGVESILSYPAKMSHAAMPPAEREARGIKDTLVRLSVGLEDPDDLIADMARFLDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-83 46
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-84 46
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-71 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM18_2009 YP_004198748.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 7e-60 41