Gene Information

Name : GM18_1515 (GM18_1515)
Accession : YP_004198258.1
Strain : Geobacter sp. M18
Genome accession: NC_014973
Putative virulence/resistance : Resistance
Product : protein tyrosine phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 1829974 - 1830393 bp
Length : 420 bp
Strand : -
Note : KEGG: ppd:Ppro_0842 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight

DNA sequence : 
ATGCCCAGGAAGAAGATCCTTTTTCTTTGCACCCACAACTCCTGCCGCTCCCAGATGGCCGAAGGGCTGGCGAACCACTT
CATGGGCGAGGAGTTCCAGGCCTATTCGGCCGGCACCGAGGCAACGCGGGTGAACCCCCTCGCCATCAAAGTCCTTTCCG
AAATCGGCGTCGACATCTCCGGACACCGCTCCAAGACGCTCGAGGAGTTCGAGGGGGAGAGCTTCGATTACGTGATCACC
CTTTGCGGGGACGCCAACGAGACCTGTCCCCTCTTCATCGGAGGCGCAAAGCGCAGCCACCGCGGCTTCGACGACCCCTC
CCGCTACTCGGGGAGCGAATCAGAGGTGCTGCCGCAGTTCCGCCGCGTGCGGGACGAAATCAAATCATGGATTCTTGAAT
TTTTCGGAGGCAACAAGTGA

Protein sequence : 
MPRKKILFLCTHNSCRSQMAEGLANHFMGEEFQAYSAGTEATRVNPLAIKVLSEIGVDISGHRSKTLEEFEGESFDYVIT
LCGDANETCPLFIGGAKRSHRGFDDPSRYSGSESEVLPQFRRVRDEIKSWILEFFGGNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 3e-25 47
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 2e-24 46
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 5e-23 45
arsC AFC76434.1 ArsC Not tested AbaR5 Protein 3e-18 43
arsC CAJ77017.1 arsenate reductase Not tested AbaR1 Protein 2e-18 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM18_1515 YP_004198258.1 protein tyrosine phosphatase BAC0581 Protein 1e-27 49
GM18_1515 YP_004198258.1 protein tyrosine phosphatase BAC0032 Protein 9e-24 46
GM18_1515 YP_004198258.1 protein tyrosine phosphatase BAC0580 Protein 5e-24 44