Gene Information

Name : GM18_1432 (GM18_1432)
Accession : YP_004198176.1
Strain : Geobacter sp. M18
Genome accession: NC_014973
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 1741447 - 1742478 bp
Length : 1032 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; KEGG: tbd:Tbd_0099 NAD-dependent epimerase/dehydratase

DNA sequence : 
GTGTCGGCTGCCTTCGAGCAGATGCAGCGTGACCTCCTGGAGCAGCCGAAGGCGTGGCTTGTCACCGGTGCCGCCGGTTT
CATCGGAAGCAACCTGGTGGAGGCCCTTTTGAGGCTGGACCAGAAGGTGGTGGGGCTGGATAACTTCGCCACCGGGAAAC
GGCAGAACCTCGAGGAGCTGCGCTCCCTCTGCCCCCCCCGCAAGTGGGAAAACTTCGCCTTCATCGAAGGGGACCTGCGG
GACCTCGACACCTGCCAAAAGGCCGCCTCGGGCATAGATTACGTGCTGCACCAGGGGGCACTGGGGAGCGTCCCCCGCTC
CCTGGCCGATCCCGTCACCAGCAATGCGGCGAACGTCACCGGTTTTCTCAACATGCTGGTCGCTGCCCGCGACGCCGGGG
TCAAGCGCTTTGTCTATGCCGCTTCCAGCTCCACCTACGGCGACCATCCCGATCTCCCCAAGGTGGAGGATCGCATCGGG
CGGCCCCTCTCCCCGTACGCGGTGACCAAGTACGTCAACGAGCTCTACGCCGACGTCTTCGCCAGAAGCTACGGCATCGA
AAGCATAGGGCTGCGCTACTTCAACGTCTTCGGGCGCCGCCAGGACCCCGACGGAGCCTACGCCGCCGTGATCCCCAAGT
GGGTCGCGTCGATGCTCAGGCGGGAGCAGGTCTTCATAAACGGCGACGGCGAGACGAGCCGCGACTTTTGCCATGTGCAA
AACGTGGTGCAGGCCAACCTGCTGTCGGCTACGACCGGCAACCCCGGCGCCGTGAACCAGGTCTACAACGTCGCGGTCGG
GGAGCGGACCTCGTTGAACCAGCTTTTCCAACTGATACGCGACTTCCTGCAGCCGGAAGCCGCCTCCCTTACCCCCGCCT
ACCGGGAGTTCCGTGCCGGGGACGTGCGTCACTCACTCGCCGACATCTCCAAGGCGGAGCGGCTTCTCGGCTATCAGCCT
ACGCACCGTATCAAGGAGGGGCTCGGGGAGGCGATGCAGTGGTACCGTGAGAACCTGCAGCGGGACTCCTGA

Protein sequence : 
MSAAFEQMQRDLLEQPKAWLVTGAAGFIGSNLVEALLRLDQKVVGLDNFATGKRQNLEELRSLCPPRKWENFAFIEGDLR
DLDTCQKAASGIDYVLHQGALGSVPRSLADPVTSNAANVTGFLNMLVAARDAGVKRFVYAASSSTYGDHPDLPKVEDRIG
RPLSPYAVTKYVNELYADVFARSYGIESIGLRYFNVFGRRQDPDGAYAAVIPKWVASMLRREQVFINGDGETSRDFCHVQ
NVVQANLLSATTGNPGAVNQVYNVAVGERTSLNQLFQLIRDFLQPEAASLTPAYREFRAGDVRHSLADISKAERLLGYQP
THRIKEGLGEAMQWYRENLQRDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 2e-107 62
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 2e-107 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM18_1432 YP_004198176.1 NAD-dependent epimerase/dehydratase VFG0430 Protein 7e-108 62