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Name : GM18_1428 (GM18_1428) Accession : YP_004198172.1 Strain : Geobacter sp. M18 Genome accession: NC_014973 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 1734053 - 1735342 bp Length : 1290 bp Strand : + Note : KEGG: gsu:GSU1942 UDP-glucose/GDP-mannose dehydrogenase family protein; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase ; UDP-glucose/GDP-mannose dehydrogenase dimerisation DNA sequence : ATGCACAATAACGATCGTATCGTATCTGTAGTCGGATTGGGTTACGTCGGGCTTCCCGTGGCTGTGGCCTTCGGAAAGAT CCGCAAAACAGTCGGCTTTGACATCAACGTGACCCGCGTTGGCGAACTGAAGGCCGGTTTCGACCGCACCGGCGAGGTCG ATGCGGCCGACCTGGCGCAGGCCGACATCCTGTTCACCGATGCCATAGCCGACCTCGCCCAGGCGGACTTCCACATCGTC GCGGTTCCGACCCCGGTGGACTCCGCGAACCAGCCCGATCTCACCCCCATGCTCAAGGCATCTGAAACGGTAGCAAAGGC CCTGAAGAAGGGGGACGTCGTCGTCTACGAATCAACCGTCTACCCGGGCGTCACCGAGGAGGAATGCGTCCCGATCCTGG AGCGGGTCTCCGGCCTTGCCTGCGGCAGGGATTTCACCGTCGGCTACAGCCCCGAACGTATCAACCCCGGCGACAAGGAA CACACCTTCACCAGGATCAAGAAGGTTGTCTCAGGGCAGGACGCTGCGACGCTCGATATCGTGGCCTCGGTGTACGAATC CGTGGTGACCGCGGGCGTGCACCGCGCCCCTTCCATAATGGTCGCCGAGGCCGCCAAGGTGATCGAGAACACCCAGCGCG ACCTGAACATCGCGCTCATGAACGAGCTGGCGCTCATCTTCGACCGCATGGGGATCGACACCAATGCGGTGCTCGAGGCG GCCGGCACCAAGTGGAACTTCCTCAGGTTCCAGCCGGGACTGGTGGGCGGCCACTGCATCGGCGTCGATCCCTACTACCT CACCCACAAGGCCGAGAAGATGGGGTACATCCCGCAGGTGATCCTGGCGGGCAGGCGCATCAACGACGGCATGGGGAAGT TCATCGCCCAGCGCACCGTCAAGGAGATGATCCGGACCGGCCACAACGTTCTCGGGGCGCGGGTGACGGTGCTGGGGCTC ACCTTCAAGGAGGATTGCCCCGACCTGCGCAACTCGAAGGTGATCGACATCATCCACGAACTGCAGGAATACGGCCTCGA TGTCCAGGTCTGCGACCCGCTGGGCGACCCGGATGAGGCCCGGCGCGAGTACGGCGTCACCCTCATCCCTGCCGAAAAAC TGCAGACCTGCGAGGCCATCGTGGTCGCGGTGGCCCACAAGGAGTACCGTAGCCTGTCGCCCGACCAGCTCTGCGGCATG ATGAACGGATCCCCCCTCGTCATCGACGTGAAGGGGATCTACGACCAGAAGCAGCTTGCCGAGAAAAATATCCGGCTCTG GAGGCTCTAG Protein sequence : MHNNDRIVSVVGLGYVGLPVAVAFGKIRKTVGFDINVTRVGELKAGFDRTGEVDAADLAQADILFTDAIADLAQADFHIV AVPTPVDSANQPDLTPMLKASETVAKALKKGDVVVYESTVYPGVTEEECVPILERVSGLACGRDFTVGYSPERINPGDKE HTFTRIKKVVSGQDAATLDIVASVYESVVTAGVHRAPSIMVAEAAKVIENTQRDLNIALMNELALIFDRMGIDTNAVLEA AGTKWNFLRFQPGLVGGHCIGVDPYYLTHKAEKMGYIPQVILAGRRINDGMGKFIAQRTVKEMIRTGHNVLGARVTVLGL TFKEDCPDLRNSKVIDIIHELQEYGLDVQVCDPLGDPDEARREYGVTLIPAEKLQTCEAIVVAVAHKEYRSLSPDQLCGM MNGSPLVIDVKGIYDQKQLAEKNIRLWRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-130 | 62 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 7e-114 | 55 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 7e-114 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GM18_1428 | YP_004198172.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 3e-114 | 55 |
