Gene Information

Name : GM18_1280 (GM18_1280)
Accession : YP_004198025.1
Strain : Geobacter sp. M18
Genome accession: NC_014973
Putative virulence/resistance : Resistance
Product : SSS sodium solute transporter superfamily protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 1549073 - 1551055 bp
Length : 1983 bp
Strand : +
Note : KEGG: gem:GM21_1373 SSS sodium solute transporter superfamily; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter

DNA sequence :
ATGAAAAAGAGGATCGCCGCTTTAACCGTCGCGCTTTCGCTATCCATTTTCGGTGCGGCCGCCGCCTGCGCCGCAGTTGC
CGCAACGGCCGCACTTCCTCAAACGGCGCCGGCGGCAACTGCACCTGGCGCGACTGCGCCTGCGCCCCCTGCGGCCGCTG
CCGCCAAGGCTGAGGTGACCCTGGCCAAGGGGGCGGCCGCCGCACCGGCCAAGATCACCCCCAACCGGGGGATCACCATC
GGCATGTTCGCGCTCATCATCGCGGTCACCATGGGGGTCGTCGTCTGGGCGGCCAAAAAAACACAGACCGCATCCGATTT
CTACACCGCCGGCGGAGGGATCACCGGCTTCCAGAACGGCTGGGCCATCGCCGGCGACTACATGTCCGCAGCCTCCTTCC
TGGGGATGTCCGGCCTCATCTCCCTCTACGGCATCGACGGCTTCATGTACGCGGTCGGACCGATGTTCTCCTTCATCGCC
ATTCTACTGGTCATCGCCGAGCCCTGCCGCAACGCCGGGAAGTACACGCTGGGCGACATCCTCTCCTTCAGAAGTTCCCC
GAAGGTGGTGCGAGGGGTCGCAGCGCTCTCCACGGTGACGGTCTCCATCTTCTACCTGATCGCGCAGATGGTCGGCGCCG
GGAAGCTGATGCAGATGCTTTTGAACATCCCGTACAAGGTCTCCGTCATCGGTGTCGGAGCCCTCATGGTTGCCTACGTT
GTCTTCGGCGGGATGAAGGCGACCACCTGGGTGCAGATCATCAAGGCCTCGCTCCTGATGGGTGCCACCACGGTTCTCTG
TGTCCTGGTCGCGATAAAGGCCGGCTTCAACCCGGTGAGTTTCTTCATGGACGTCGTCAACAGCAGCGCCATCCAGGAGC
ATGTCAGGATGAACGTGCTGAAGGACGTGGTTGCCAAGCCCGGCGTCGACTACGGCCAGAGGTTCATGGAGCCCGGTCTC
TTCCTGAAAAGCCCTCTGGACCAGATCTCGCTCGGCCTGGCCTGGGCGCTCGGCGCCGCGGGGTTGCCTCACATCCTGAT
GCGCTTCTTCACCGTTCCCAGCGCGAAGGATGCGCGCAAGTCGATCATCATCGCGCTCTTTCTCAACTCCACCTTCTTCT
TCATGATCAGCGTGATCGGCTTCGGCGCGGCCCTCTACCTCACCCCGCAGGCGATCTCCGCCGTGGACAAGGGGGGCAAC
ATGGCGACCCTCTTGCTGGCCCAGCACATGGGGGGCGGCCCGGGAAGCCTCGGCGGCGACATCTTCCTCGCCTTCATCTG
CGCGGTCGCCTTCGCGACCATTCTGGCGGTCGTGTCCGGCCTGGTGCTGGCCGCCTCCGCCGCCATAGCGCACGACGTCT
ACGTCAACATCATCAAGGATGGCAAGGCGGACCAGCACCTGCAGGTAAAGGTGGCCAGGATCACCTCCCTCTTCGTCGGG
ACCTCGGCCATCGTCATGGGGCTCATGGCGGAGAAGGAGAACGTGGTGGCCCTGGTGGCACTGGCCTTCGCCGTCGCCGC
CTCCGGGAACTTCCCGGTGGTGATGCTCTCCCTCTTCTGGCGCAAGTTCAACACTGCGGGGATCGTCTCGGGGCTCGTGG
TCGGTACGGTGTCCGCCCTGGCCCTGGTGATGGTTTCGCCGGTCATGACCTACCCCAAGAAGATCGCCGCCGATGCCAGG
AAGGTGGTGGATACCCTGGAGAAGAAGCAGGCAGGCGGCGCCGTGCTGGCCGAAAAGGAGGTGCAGGCCCTGGTGAAGTC
GAGGGCGGAATACGCGAAAAACAAGAACGGCACGTCGATGGTGGGACTCGATGCCCCGATCTTCCCGCTCAAGAATCCGG
GCATCGTCTCGGTCCCCCTGGGCTTCATGGCGGCCTTCTTCGGCTGCCTCCTGTTCCGGGAACGCCGTGCCGAGGAGATG
TTCGACGAGATCGACGTGCGCCAGAATACCGGGATCGGCATCGCCAAGGCGGCCGAGCATTAG

Protein sequence :
MKKRIAALTVALSLSIFGAAAACAAVAATAALPQTAPAATAPGATAPAPPAAAAAKAEVTLAKGAAAAPAKITPNRGITI
GMFALIIAVTMGVVVWAAKKTQTASDFYTAGGGITGFQNGWAIAGDYMSAASFLGMSGLISLYGIDGFMYAVGPMFSFIA
ILLVIAEPCRNAGKYTLGDILSFRSSPKVVRGVAALSTVTVSIFYLIAQMVGAGKLMQMLLNIPYKVSVIGVGALMVAYV
VFGGMKATTWVQIIKASLLMGATTVLCVLVAIKAGFNPVSFFMDVVNSSAIQEHVRMNVLKDVVAKPGVDYGQRFMEPGL
FLKSPLDQISLGLAWALGAAGLPHILMRFFTVPSAKDARKSIIIALFLNSTFFFMISVIGFGAALYLTPQAISAVDKGGN
MATLLLAQHMGGGPGSLGGDIFLAFICAVAFATILAVVSGLVLAASAAIAHDVYVNIIKDGKADQHLQVKVARITSLFVG
TSAIVMGLMAEKENVVALVALAFAVAASGNFPVVMLSLFWRKFNTAGIVSGLVVGTVSALALVMVSPVMTYPKKIAADAR
KVVDTLEKKQAGGAVLAEKEVQALVKSRAEYAKNKNGTSMVGLDAPIFPLKNPGIVSVPLGFMAAFFGCLLFRERRAEEM
FDEIDVRQNTGIGIAKAAEH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 9e-62 46
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 4e-58 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM18_1280 YP_004198025.1 SSS sodium solute transporter superfamily protein BAC0570 Protein 9e-73 48
GM18_1280 YP_004198025.1 SSS sodium solute transporter superfamily protein BAC0564 Protein 2e-66 43