|
Name : GM18_1138 (GM18_1138) Accession : YP_004197889.1 Strain : Geobacter sp. M18 Genome accession: NC_014973 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1382745 - 1384466 bp Length : 1722 bp Strand : + Note : PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: gem:GM21_3004 type II secretion system protein E DNA sequence : ATGCTGAAGCCGTTCAAGAGACAGAGACTGGGCGAAATCCTGCTGGAGCAGGGGGAACTGACCGCTGATCAGCTGACCTA TGCCCTCGACAAGCAGCAAAGCACCAGGGAGCGCCTGGGTGCCATCTGCCTCGCCGATGGGCTGATCAGCGACTTCGTGC TGGCCCGGGCGCTGGCCCGGCAGTTCGGACTGGAGTTCATCGACCTCAAGGGGATGCGTCCGGACGAGTCTCTGTTCAGC ATCGTCCCGCCCGAGGTGATGTTCCGCTACCACTTCGTGCCCCTGGAGCTGCAGGGGGACCTGCTGGCGGTGGCGATCTC CGACCCGACCGCGGTGCTGCAGCTGGACGAGATCTCGCTCCTGTTGGAGCGGCCGCTCCTCTTCAAGGTGGCGGCGGAGT CCGAGATCGCCCACCTGCTCAAGCGGGGCGAGGGGACCAGCCGCGTTTTGAAGGAAGTCTCCGAGGACTTCATGCTGCAA CTGGTGACCGAGACCGAGAGGGGAGAGGAAATCCTCTCCGTCGAGAACGTCTCCGCCGACACCAGTCCGATCATCAAGCT GGTCAACTCCACCATCCTCGACGCCCTCACCAGGCGCGCCTCCGATATCCACATCGAGACCGCCCAGGAGGGGGTGATCA TCAAGTACCGTATCGACGGGGTGCTCTACAAGGCGACCGACCCGATCGACAACCACTTCCAGGGGCCGCTCATCTCCAGG CTCAAGGTCATGAGCGAGCTGGATATCTCGGAGCGGCGCATCCCGCAGGACGGCAGGTTCAAGGTCCGCATCGGCGCGAA ATCCATCGACTTCCGTGTCTCCATCATGCCCAGCGCCTTCGGCGAGGACGCGGTCATCCGTATCCTGGACAAGGAGAGCA TCGCCAGCGATCTCAGGGGGCTCACCCTGGAGACGCTCGGCATGGCCTCCCATGAGATCAAGCGCTTCAGGAAGATGATC AAGGAGCCCTACGGCATGGTGCTGGTCACCGGCCCCACCGGCAGCGGCAAGACCACCACCCTCTACGGTGCGCTCACCGA GATCCACACCGGACTGGAGAAGATCATCACCATCGAGGACCCGGTCGAGTACGTCCTCTCCGGGATCACCCAGATCCCGG TGAACGAGAAGAAGGGGCTCACCTTCGCCCGCGGTCTGCGCTCCGTCTTGCGCCACGACCCGGACAAGATCATGGTCGGC GAGATCCGTGACTCCGAGACGGCGCAGATCGCGGTGCAGTCCGCGCTTACCGGTCACCTGGTGTTCACCACCGTGCACGC CAACAACGTCTTCGACGTGATCGGCCGCTTCACGCACATGGGGATCGACCCCTATAACTTCGTCGCCTGCCTGAACTGCG TCATGGCCCAGCGCCTGGTGCGCAAGATCTGCCCCTCCTGCAAGAAGGCGGTCACCATCACGGACGAGGAGCTGCGCGAG TCCGCCATCGATCCGGAAAGGGCCCGCGGCCTCACCCTGTACGAGGCGAGGGGGTGCGACGACTGCAACGGCACCGGCTA CCGCGGCCGCTCGGCCATCGTCGAGCTCCTCGACCTGAACGACGAGATCCGCGAACTGATCATCTCGAAGGCGCCGATAG CCTCCCTGAAAAAGGCCGCCAAGGCCGCGGGGACCATGTTCCTCAGGGAGTCGGCGGTGGCCAAGGTGTTGGCGGGTGAA ACCACGCTGAAGGAGATCAACCGTGTCACCTTTGTGGAGTAG Protein sequence : MLKPFKRQRLGEILLEQGELTADQLTYALDKQQSTRERLGAICLADGLISDFVLARALARQFGLEFIDLKGMRPDESLFS IVPPEVMFRYHFVPLELQGDLLAVAISDPTAVLQLDEISLLLERPLLFKVAAESEIAHLLKRGEGTSRVLKEVSEDFMLQ LVTETERGEEILSVENVSADTSPIIKLVNSTILDALTRRASDIHIETAQEGVIIKYRIDGVLYKATDPIDNHFQGPLISR LKVMSELDISERRIPQDGRFKVRIGAKSIDFRVSIMPSAFGEDAVIRILDKESIASDLRGLTLETLGMASHEIKRFRKMI KEPYGMVLVTGPTGSGKTTTLYGALTEIHTGLEKIITIEDPVEYVLSGITQIPVNEKKGLTFARGLRSVLRHDPDKIMVG EIRDSETAQIAVQSALTGHLVFTTVHANNVFDVIGRFTHMGIDPYNFVACLNCVMAQRLVRKICPSCKKAVTITDEELRE SAIDPERARGLTLYEARGCDDCNGTGYRGRSAIVELLDLNDEIRELIISKAPIASLKKAAKAAGTMFLRESAVAKVLAGE TTLKEINRVTFVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-89 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-89 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GM18_1138 | YP_004197889.1 | type II secretion system protein E | VFG2048 | Protein | 5e-91 | 44 |
| GM18_1138 | YP_004197889.1 | type II secretion system protein E | VFG1876 | Protein | 4e-84 | 43 |
