Gene Information

Name : GM18_1057 (GM18_1057)
Accession : YP_004197808.1
Strain : Geobacter sp. M18
Genome accession: NC_014973
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 1278430 - 1279149 bp
Length : 720 bp
Strand : +
Note : TIGRFAM: ribonuclease PH; KEGG: gem:GM21_3070 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2

DNA sequence :
ATGACACGCACAAACGGCCGCGCGGCCGACGCACTGAGAGAAGTAAAGATCACCCGCAACTATCTGAAGCACGCCGAAGG
TTCGGTGCTGATCGAGTTTGGAGACACCAAAGTCATCTGCAACGCCACCGTCGAGACGAAGGTGCCGTCCTTTCTGAAAG
GGAAGGGGACCGGCTGGGTGACCGCCGAGTACTGCATGCTGCCGCGCGCAACCCACACCAGGAACCAGCGCGAGTCCTCC
AAGGGGAAGCTCTCCGGGCGCACCCACGAGATCCAACGCCTGATCGGCAGGTCGCTGCGCGCCGTGGTGGACATGGAGAA
ACTGGGCGAGCGTTCCATCCTGATCGACTGCGATGTGATCCAGGCCGACGGCGGCACCCGCACCGCCTCCATCACCGGCG
CCTACGTGGCGCTCGCCGACGCGCTGCAGAGCCTCGTGGACAACGGCGAACTGACCCGGAGCCCGCTGCGCGAGGCGGTC
GCCGCGGTGAGCGTCGGGATCGTGGATGGCGTTCCTTTCCTCGACCTCGACTACCCCGAGGACTCCAGCGCCGAAGTGGA
CATGAACTTCGTGATGACCTCCTCGATGCGCTTCGTCGAGGTGCAGGGAACCGCCGAGGCCGAGCCCTTCACCATCGAGC
AGATGGACGCCATGCGCAGCCACGCCATACTCGGGCTCACCCGGCTCTTCGAGATCCAGCAGGAGGCGCTTGGCGCATGA

Protein sequence :
MTRTNGRAADALREVKITRNYLKHAEGSVLIEFGDTKVICNATVETKVPSFLKGKGTGWVTAEYCMLPRATHTRNQRESS
KGKLSGRTHEIQRLIGRSLRAVVDMEKLGERSILIDCDVIQADGGTRTASITGAYVALADALQSLVDNGELTRSPLREAV
AAVSVGIVDGVPFLDLDYPEDSSAEVDMNFVMTSSMRFVEVQGTAEAEPFTIEQMDAMRSHAILGLTRLFEIQQEALGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 5e-66 59