Gene Information

Name : Despr_0720 (Despr_0720)
Accession : YP_004194186.1
Strain : Desulfobulbus propionicus DSM 2032
Genome accession: NC_014972
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 792332 - 793360 bp
Length : 1029 bp
Strand : +
Note : COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR008089: IPR010916; KEGG: dvm:DvMF_2280 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein; PFAM: NAD dependent

DNA sequence : 
ATGGAAAGGTATCACGAGCGCCGGCAACAGCTGCACCAGCAGCCCGCCACCTGGCTGGTCACCGGCGTTGCCGGATTTAT
CGGCTCGAATTTACTGGAAAGTTTGCTGGTCTTGGGGCAACGGGTGGTTGGCCTGGACAACTTCGCCACCGGGTTTCAGC
ATAACCTGGACGAGGTGCGGACGCGGGTGGGCGCGGCGGCTTGGCAGCGGTTCTGTTTCATCGAGGGCGATATCCGCGAA
CTGGCTGTCTGCCGCGAGGCCTGCACCGGCGTGGATTATGTGCTCCATCAGGCGGCGCTTGGCTCGGTGCCCCGTTCGAT
CGAGGACCCGATCACCACCAACGAGAGCAACATCACCGGCTTTGTCAACATGCTGGTGGCGGCGAGGGATGCCAGGGTGC
GCCGCATGGTCTATGCCGCCTCCAGCTCCACCTACGGCGACCACCCCGACCTGCCCAAGGTCGAGGAGCGGATCGGCAAC
CCGCTCTCGCCCTATGCGGTCACCAAGCTGGTCAACGAGCTGTATGCTGATGTTTTTGGCCGCGTCTACGGTTTTGCACC
CATTGGCCTGCGCTACTTCAACATCTTCGGTCAGCGCCAGGACCCGGATGGCGCCTATGCGGCGGTCATTCCCAAGTGGT
TTGCCGGCTTGCTCAAAAATGAACCGATCTACATCAACGGCGACGGCGAAACCAGCCGCGACTTCTGCTTCATCGACAAC
TGCGTCCAGGCCAACATCCTCGCCGCCACCGCCGACGACCAGGCTGCCGGCCAGGTCTACAACGTGGCGTTTGGCGAGCG
CACCACGCTCAACGAACTGTTCGCCCTCATCCGCGAACGGGTGACGACGCGCATGCCAGCCGCGGCCCAGGCCGAACCCG
TCTACCGCGACTTCCGTGCCGGCGATGTGCGCCACTCCCTGGCCGATATCTCCAAGGGGGCCCGGCTGATAGGCTACCAG
CCCGAATACTCGGTGCGCACTGGGCTCGACAAGGCGGCGGATTGGTATATGGAGAGGTTTTTAGGGTGA

Protein sequence : 
MERYHERRQQLHQQPATWLVTGVAGFIGSNLLESLLVLGQRVVGLDNFATGFQHNLDEVRTRVGAAAWQRFCFIEGDIRE
LAVCREACTGVDYVLHQAALGSVPRSIEDPITTNESNITGFVNMLVAARDARVRRMVYAASSSTYGDHPDLPKVEERIGN
PLSPYAVTKLVNELYADVFGRVYGFAPIGLRYFNIFGQRQDPDGAYAAVIPKWFAGLLKNEPIYINGDGETSRDFCFIDN
CVQANILAATADDQAAGQVYNVAFGERTTLNELFALIRERVTTRMPAAAQAEPVYRDFRAGDVRHSLADISKGARLIGYQ
PEYSVRTGLDKAADWYMERFLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 2e-105 64
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 2e-105 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Despr_0720 YP_004194186.1 NAD-dependent epimerase/dehydratase VFG0430 Protein 1e-105 64