Gene Information

Name : Despr_0656 (Despr_0656)
Accession : YP_004194123.1
Strain : Desulfobulbus propionicus DSM 2032
Genome accession: NC_014972
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 710822 - 711286 bp
Length : 465 bp
Strand : +
Note : COGs: COG2165 Type II secretory pathway pseudopilin PulG; InterProIPR012902: IPR013545: IPR000983: IPR010054: IPR 001120; KEGG: dat:HRM2_11400 GspG1; PFAM: type II secretion system protein G; SPTR: GspG1; TIGRFAM: general secretion pathway protein G; PFAM

DNA sequence : 
ATGACTGCACGACGTACACGCATGGCCCATCTTCTCAGCACCTCCCACGGATTCACCCTGATCGAACTGATGGTAGTCAT
GGTGATCCTGGGCATCCTGGCCGGACTCATTGTCCCGCGGATCATGGATCGGCCGGAGGAGGCGCGGCGCACCAAGGCCG
GAGTCCAGATCCAGTCCATCGAACAGGCCCTGAAACTGTACAAGATCGACAATGGGCAGTACCCCACCACGGAGCAGGGC
CTGGTCGCCCTGGTCGAGCCGCCGACGGTCGGGGTGCTGGCCAAGCGGTGGCGGGCAGGGGGATATCTGGACAAGGGCAA
GGTGCCCAAGGATCCGTGGGACAACGAGTTTGTGTATATCTCTCCGGGGTTGCACGGCGATTTTGATCTGAGCTCCTACG
GTCCGGATGGACAAGCCGGCGGCGAGGGCAAGGACGAGGACATCAACAACTGGGAATTGGAATAG

Protein sequence : 
MTARRTRMAHLLSTSHGFTLIELMVVMVILGILAGLIVPRIMDRPEEARRTKAGVQIQSIEQALKLYKIDNGQYPTTEQG
LVALVEPPTVGVLAKRWRAGGYLDKGKVPKDPWDNEFVYISPGLHGDFDLSSYGPDGQAGGEGKDEDINNWELE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-31 52
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-31 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Despr_0656 YP_004194123.1 general secretion pathway protein G VFG0180 Protein 2e-32 54
Despr_0656 YP_004194123.1 general secretion pathway protein G VFG1871 Protein 9e-36 52
Despr_0656 YP_004194123.1 general secretion pathway protein G VFG2050 Protein 9e-32 51