Gene Information

Name : Despr_0444 (Despr_0444)
Accession : YP_004193916.1
Strain : Desulfobulbus propionicus DSM 2032
Genome accession: NC_014972
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 454689 - 456338 bp
Length : 1650 bp
Strand : +
Note : COGs: COG4172 ABC-type uncharacterized transport system duplicated ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: avn:Avin_29680 ABC transporter, ATP binding component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transpo

DNA sequence :
ATGGCCTCCCTGCTGACCATCGACCACTTCAACCTCACCTTTCTCGGCGCCGAGGGCGATCGCTCTCCGGTGCTCCACGA
CATCAGCCTGCACATTGCCCCTGGGGAAACCCATGCCCTGGTGGGCGAGTCCGGTTCCGGCAAGTCGGTCACCGCCCTGT
CGATCCTTCGCCTGCTGGAAGAGACCAATCAAGTGCACGCCAGCGGCTCCATCGTCTTTGAAGGCCAGGAACTGACCACG
CTGGACAAGCAGGCCATCCGCGCCATTCGCGGCAACCGCATCGCCATGATCTTCCAGGAGCCGATGACCTCGCTCAACCC
GGTCTACACCATCGGCAATCAGCTGATCGAACCGCTGCTGCTCCACCAGGGGCTGAGCAAGGCCGAGGCCGCCGCCCAGG
CCCTGTACCTGCTGGAACGCACCGGCATCGACAACCCGGAATACCGCATCAACTGTTATCCGCACCAGCTCTCGGGTGGC
CAGCGTCAACGGGTGATCATCGCCATGGCCCTGGCCTGCCGGCCCACCCTGCTCATCGCCGACGAGCCGACCACCGCCCT
CGACGTAACCATCCAAGAGCAGATCCTTCGCCTGATCAAAGACATCCAGGCCGAATACGCCATGTCGGTGCTGCTCATCA
CCCACGACCTGCCCATGGTGCAGAAGATCGCCGACACGGTGTCGATCATGCATCGTGGCCGCATTGTCGAGCAGGGAGCC
GTAAGCGAGATTTTTTCTACGCCCGGGGAGGCGTACACCCGCCACCTGTTGGCCGCCGTGCCCCAGGGCGTGCAGCAGAC
CCGGCAAGGCGGGCCAAAACTGATCGAACTGCGGGGGATCACCTGTTCCTTTGCCATGAAAACCCCGTGGTCGGGCTGGT
TGACGCGCCAGAAACGGATCATCAAGGCGGTGGATGACGTCAGCCTTAGCCTCAACCAGGGCACCACCTTGGGCCTGGTG
GGCGAATCCGGTTCGGGCAAGTCGACGCTCGCCCTGTGCCTGCTTGGCCTCAACACCTTTGACGGCCAGGTGCTCTACTT
TCCCCAGACCGGGGTCAGTCACTGCCTTTCCGATCTGACCACCAGGCAGTTCCGGCCGCTGCGCAAGGAGCTGCAGATCG
TCTTCCAGGATCCCTTTTCCTCGCTGTCGCCCCGGATGACCATCGAGCAGATCGTGGCCGAAGGCTTGCAGGTCCATGGC
CTGGGCGGCACCAAGGAAGAACGCCGGACCCTGGTGGCCCAGGCCCTGGAGGATGTGGAGCTCGATCCCGGCCTGGCGGG
CCGCTTTCCTCACGAGTTTTCCGGCGGCCAGCGGCAGCGGATCGCCATTGCCCGCGCCCTGATCCTCCGCCCCAAGTTGC
TGATCCTCGACGAACCCACCAGCGCGCTCGACATGACCATCCAGAAACAGATCCTCGAACTGCTCAAGGACCTGCAGCAG
CGCTATCAACTCACCTACATCTTCATCACCCACGACCTGCGCACCGTGCGCTCGCTGGCCGACCAGTTGGCGGTGATGCG
CCAGGGCCGCATCGTCGAGGCCGGACCGGCGGCCGCCGTCTTTGCCAACCCGCAGCAGGAGTACACGCGGCGGCTCTTTG
ACGCCGCCTTCCACCTCAATCAACGCCTGGAGAATCGCCCATGCCCATGA

Protein sequence :
MASLLTIDHFNLTFLGAEGDRSPVLHDISLHIAPGETHALVGESGSGKSVTALSILRLLEETNQVHASGSIVFEGQELTT
LDKQAIRAIRGNRIAMIFQEPMTSLNPVYTIGNQLIEPLLLHQGLSKAEAAAQALYLLERTGIDNPEYRINCYPHQLSGG
QRQRVIIAMALACRPTLLIADEPTTALDVTIQEQILRLIKDIQAEYAMSVLLITHDLPMVQKIADTVSIMHRGRIVEQGA
VSEIFSTPGEAYTRHLLAAVPQGVQQTRQGGPKLIELRGITCSFAMKTPWSGWLTRQKRIIKAVDDVSLSLNQGTTLGLV
GESGSGKSTLALCLLGLNTFDGQVLYFPQTGVSHCLSDLTTRQFRPLRKELQIVFQDPFSSLSPRMTIEQIVAEGLQVHG
LGGTKEERRTLVAQALEDVELDPGLAGRFPHEFSGGQRQRIAIARALILRPKLLILDEPTSALDMTIQKQILELLKDLQQ
RYQLTYIFITHDLRTVRSLADQLAVMRQGRIVEAGPAAAVFANPQQEYTRRLFDAAFHLNQRLENRPCP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-76 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-76 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-76 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 1e-76 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 4e-94 42