Gene Information

Name : Despr_3184 (Despr_3184)
Accession : YP_004196603.1
Strain : Desulfobulbus propionicus DSM 2032
Genome accession: NC_014972
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 3662589 - 3663149 bp
Length : 561 bp
Strand : -
Note : COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: gme:Gmet_1337 sugar transferase; PFAM: sugar transferase; SPTR: Sugar transferase; PFAM: Bacterial sugar transferase

DNA sequence : 
ATGAAAAGAATGATTGATGTCGTGATGGCCCTTTGCCTGGCCGCGGTGTTGGCCCTGCCGATGGCAGTGGTGGCCCTGTT
GATTAAGCTCACCTCGAAAGGGCCCGTCCTGTACTGGTCCGATCGGGTCGGGAGAGACAACGCCCTCTTCAAAATGCCCA
AATTTCGCACCATGCAGGTCAACACCCCGGTGGTGGCCACGCATTTGCTCGAAAATCCCGATCATTATCTCACGGTGATC
GGCAAATTTCTGCGCAAAAGCAGCTTGGATGAATTGCCGCAGTTGTTCAGCATTATCAAGGGAGATATGAGCTTTGTCGG
TCCCCGGCCGGCATTGTTCAATCAAGACGACCTCATTGAACTGCGGACTCGAAAGGGCATCCATCGATTGACGCCAGGTC
TCACTGGATGGGCGCAGATCAACGGCAGGGATGATCTGCCCATTCCAGTGAAGGTTGGCTATGACGAATACTATCTGCAA
CACCGATCCCTCCTGCTCGACCTGCACATCCTTTTCAGGACCTTTGTGAAGGTGGCCAGGCAAGAAGGGGTTGTCCACTG
A

Protein sequence : 
MKRMIDVVMALCLAAVLALPMAVVALLIKLTSKGPVLYWSDRVGRDNALFKMPKFRTMQVNTPVVATHLLENPDHYLTVI
GKFLRKSSLDELPQLFSIIKGDMSFVGPRPALFNQDDLIELRTRKGIHRLTPGLTGWAQINGRDDLPIPVKVGYDEYYLQ
HRSLLLDLHILFRTFVKVARQEGVVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 2e-36 53
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 1e-36 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Despr_3184 YP_004196603.1 sugar transferase VFG1309 Protein 1e-37 50
Despr_3184 YP_004196603.1 sugar transferase VFG1369 Protein 1e-30 49