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Name : Despr_3070 (Despr_3070) Accession : YP_004196494.1 Strain : Desulfobulbus propionicus DSM 2032 Genome accession: NC_014972 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 3532016 - 3533566 bp Length : 1551 bp Strand : - Note : COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584: IPR017895; KEGG: maq:Maqu_1224 integrase catalytic subunit; PFAM: Integrase catalytic region; SPTR: Integrase, catalytic region; PFAM: Integrase core domain DNA sequence : ATGCCGGCGGAGAGATTATCCATGCGCAAGATTTACGAAATACTGCGGTTAAAGTATGGCCACGGATTGAGCAATCGAGA GGTGGCCTTGAGTGTGTCGGTGAGCCGGAGCACGGTGGCGGATTACCTGCTGCGCGCCCAGGCTGCAGGGCTTTCCTGGC CGTTGCCTGACGGACTGGATGAGAAGGGGTTGGAGCAACGACTGTTTCCCTCGGTAAGCCCCGAAAGGCAACAAAGCCTG CCGCAACCCGATTGGGTCGAAGTACAACGGGAGCTGCGGCATAAAGGCGTAACTTTGGCCCTGCTCTGGCAGGAGTACAA AGAAAAGCATCCGGAGGGGTGCCAATACAGCTGGTTTTGTCAGCAGTACGAACGGTGGCGGGGCACCGTCGACCCGGTGA TGCGTCAGGAACATCGCGCCGGAGAGAAGCTGTTTGTCGACTATGCCGGTCAGACCATGGAGGTATTGGAGGGCAAGACC GGTGAGATCCGCAAAGCAGAGATTTTTGTCGCCACTTTGGGAGCCAGTAACCTGACGTACTGCGAGGCGACCTGGAGCCA GGGACTGCCGGACTGGATCGGTTCGCACGTTCGTTGCTTTGCTTTTCTCGGTGGTGTCCCAGAGGTGGTGGTTCCTGACA ACCTCAAAAGCGGTGTGAGCAAAACCTGCCGCTACGAGCCAGAGTTGAACCCCACCTATCAGGACATGGCCACGCAGTAC GGTGTGGCGGTCCTGCCGGCCCGGGTTCGCGCCCCACGCGACAAAGCCAAGGTGGAAACTGCGGTTCAGATCGTTGAACG GCAGATCCTGGCCAAACTGCGGCACCAACGGTTCTTCTCCCTTGCGGAGTTGAACCAGGCCATCAGCCAACACCTGCACG CACTCAACACCAAACCCTTCCAGAAACTTCCCGGTTCACGCCAAAGCCTGTTCCACAGCCTCGACCAACCGGCCCTTAAG CCTTTGCCGGCCACACCGTACGAGTTTGCTCTGTGGAAGAAGGCCACGGTGCATATCGATTATCACGTCGAAGTAGACGG GCATTATTACAGCGTCCCCTCCCGGCTGGTGAAAAAGCGGCTCGACATCCGCATCACCTCGTCCGTAATCGAATGTTTTG ACCGGGGACAACGGGTTGCCAGTCATCAACGCAGTCGGGACAAGGGCCGCCACACCACGGTAACCGAGCACATGCCGCCG GCGCACCGGCAGTATCAACAGTGGACACCGGAACGGTTTCTCCGCTGGGCAGCCAAGATCGGCCCACTGACCACGCAACT CACCGAAAAAATCCTGGCCTCCCGCGTGCATCCTCAACAGGCCTATCGCAGCTTGATGGGCATTCTTCGTTTAGGCAAGA GCTATGGCAACGACCGGCTGGAGCAGGCCTGCGGCCGGGCGCTGGTCATCGGTGCGGTCTCTTTCCGCAGCATTGACTCC ATCCTCAAAAACGGTCTGGACAAGGCCAATGAGGAGGAGGTGGCGGCTCCGAGCCCTGTGGTTCACGACAACATCCGCGG CCCTCACTATTACCACCCCACGTTGCAGTAA Protein sequence : MPAERLSMRKIYEILRLKYGHGLSNREVALSVSVSRSTVADYLLRAQAAGLSWPLPDGLDEKGLEQRLFPSVSPERQQSL PQPDWVEVQRELRHKGVTLALLWQEYKEKHPEGCQYSWFCQQYERWRGTVDPVMRQEHRAGEKLFVDYAGQTMEVLEGKT GEIRKAEIFVATLGASNLTYCEATWSQGLPDWIGSHVRCFAFLGGVPEVVVPDNLKSGVSKTCRYEPELNPTYQDMATQY GVAVLPARVRAPRDKAKVETAVQIVERQILAKLRHQRFFSLAELNQAISQHLHALNTKPFQKLPGSRQSLFHSLDQPALK PLPATPYEFALWKKATVHIDYHVEVDGHYYSVPSRLVKKRLDIRITSSVIECFDRGQRVASHQRSRDKGRHTTVTEHMPP AHRQYQQWTPERFLRWAAKIGPLTTQLTEKILASRVHPQQAYRSLMGILRLGKSYGNDRLEQACGRALVIGAVSFRSIDS ILKNGLDKANEEEVAAPSPVVHDNIRGPHYYHPTLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_3528 | YP_854247.1 | transposase for ISEc12 | Not tested | PAI I APEC-O1 | Protein | 3e-125 | 52 |
| unnamed | CAC39294.1 | hypothetical protein | Not tested | LPA | Protein | 4e-125 | 52 |
| ORF_6 | AAZ04417.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 3e-125 | 52 |
| VPI2_0005c | ACA01822.1 | IstA | Not tested | VPI-2 | Protein | 6e-109 | 45 |
