Gene Information

Name : Despr_0301 (Despr_0301)
Accession : YP_004193776.1
Strain : Desulfobulbus propionicus DSM 2032
Genome accession: NC_014972
Putative virulence/resistance : Unknown
Product : transposase IS200-family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 300762 - 301193 bp
Length : 432 bp
Strand : +
Note : COGs: COG1943 Transposase and inactivated derivatives; InterPro IPR002686; KEGG: ppd:Ppro_2857 transposase IS200-family protein; PFAM: transposase IS200-family protein; SPTR: Transposase IS200-family protein; PFAM: Transposase IS200 like

DNA sequence :
ATGAACGACATACAATGTTTAAGCCACACAAGATGGGATTGCAAGTTCCATGTAGTGTGGATACCGAAATGCCGAAGAAA
AATACTCTATGGCCAACTTCGGAAAAATCTGGGTGATGTGTTCCATGATCTTGCACGGCAAAAAGAAAGTCGGATTGTCG
AGGGGCATTTGCAGCCCGATCATGTGCACATGCTACTGTCGATCCCGCCGAAGTATTCGGTGGCCCAGGTTGTGGGCTAC
ATGAAAGGGAAAAGTGCGATTTACATCGCACGCAATTACCTTGGGCAAAAGAAGAACTACAATGGGATGCACTTTTGGGC
ACGGGGCTATTTTGTGTCAACCGTTGGTGCCGACGAGGCAATGGTTCGCGCATATATCCGTAACCAGGAGCAAGAGGATC
AGCGAGTCGAACAACTGAACTTGTTTAAATAG

Protein sequence :
MNDIQCLSHTRWDCKFHVVWIPKCRRKILYGQLRKNLGDVFHDLARQKESRIVEGHLQPDHVHMLLSIPPKYSVAQVVGY
MKGKSAIYIARNYLGQKKNYNGMHFWARGYFVSTVGADEAMVRAYIRNQEQEDQRVEQLNLFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 9e-29 47
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 4e-24 46
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 3e-24 46
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 2e-28 44
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 1e-25 44