Gene Information

Name : Despr_0272 (Despr_0272)
Accession : YP_004193747.1
Strain : Desulfobulbus propionicus DSM 2032
Genome accession: NC_014972
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator, AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 265810 - 266025 bp
Length : 216 bp
Strand : -
Note : COGs: COG3311 transcriptional regulator protein; InterPro IPR010260; KEGG: bpt:Bpet1289 putative transcriptional regulator (phage-related); PFAM: Prophage CP4-57 regulatory; SPTR: Phage Transcriptional Regulator, AlpA; PFAM: Prophage CP4-57 regulatory pro

DNA sequence :
ATGTCAAGCCAAGCACCGCCGAAAACCCTACTCAGAAGGCCGGATGTTGAGAAGCGCACCGGCCTGAAACGCGCCCACAT
CTACGCCCTGATGAAGCAAGGGGAGTTCCCGCAAGCCGTACCTCTGGCCGGCCGGGCCGTGGCCTGGATTTCCGATGAGA
TCGACAACTGGATATCAGGCCGCATCCAGCAAGCCCGAAGCGGTAACGTCGCATAA

Protein sequence :
MSSQAPPKTLLRRPDVEKRTGLKRAHIYALMKQGEFPQAVPLAGRAVAWISDEIDNWISGRIQQARSGNVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 7e-14 53
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 5e-12 53
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 3e-09 49
unnamed CAA21398.1 - Not tested HPI Protein 1e-10 46
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 1e-10 46
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 2e-08 45
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 2e-09 43
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 3e-09 43
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 3e-09 43
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 2e-09 42
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 2e-09 42
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 1e-09 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Despr_0272 YP_004193747.1 phage transcriptional regulator, AlpA VFG1141 Protein 9e-10 43
Despr_0272 YP_004193747.1 phage transcriptional regulator, AlpA VFG1118 Protein 5e-10 42