Gene Information

Name : Despr_2194 (Despr_2194)
Accession : YP_004195629.1
Strain : Desulfobulbus propionicus DSM 2032
Genome accession: NC_014972
Putative virulence/resistance : Unknown
Product : alanine racemase domain-containing protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 2504788 - 2505495 bp
Length : 708 bp
Strand : +
Note : COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR001608: IPR011078; KEGG: dps:DP2780 hypothetical protein; PFAM: alanine racemase domain protein; SPTR: Putative uncharacterized protein; PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal

DNA sequence :
ATGATTGTCGATAATCTTACCCGAATTTTGACCACCATCGCGACAGCAGCGCGCAGATCAGGAAGGCATCCAGATACCGT
CCAGTTGGTAGCGGTCAGTAAACAAGTCGGAGTAGAAGCCATTTGCGAGGCGGTCGCGGGCGGGCAAATGCTGTTCGGAG
AAAACTATCTCCAGGAGGCAGCGGACAAAATCCCTCAATTGCCGCCCACGGTTCAGTGGCATTTCATCGGTCATCTGCAA
AGCAATAAAGCGGCACAAGTGGCGGAACTCTTTACCATGGTGGAGACGGTCGATCGCTTCAAAGTCGCCAAGGCGCTCGA
TCTGCATGCCAAGCGATTAGACAAGCACCTGTCCATCCTCATCCAGGTCAATATCGGCCGGGAAAAACAGAAATCCGGGG
TAATGCCCGAGGAAACAACAGAGCTTCTGCACGCCATCAGCGCGGAAACCAATCTTCGTGTTCGCGGTCTGATGGCGCTG
CCCCCCTTTTTCTCCGATCCAGAAAAAAGCCGTCCCTATTTTCGCGCGCTCAGAGAACTCGCCCAACAGCTGGCCGTAAA
AAAATTATTCCATGACAACGACGCTATTGAACTTTCCATGGGGATGTCCAACGATTATCCTGTGGCGATCGAGGAAGGGG
CAACCATTGTCCGCGTCGGAACAGCGCTGTTTGGCAGCAGAATGAAAGAAGGAGTTGAAAAAAAATGA

Protein sequence :
MIVDNLTRILTTIATAARRSGRHPDTVQLVAVSKQVGVEAICEAVAGGQMLFGENYLQEAADKIPQLPPTVQWHFIGHLQ
SNKAAQVAELFTMVETVDRFKVAKALDLHAKRLDKHLSILIQVNIGREKQKSGVMPEETTELLHAISAETNLRVRGLMAL
PPFFSDPEKSRPYFRALRELAQQLAVKKLFHDNDAIELSMGMSNDYPVAIEEGATIVRVGTALFGSRMKEGVEKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 9e-27 42
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 9e-27 42
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 9e-27 42
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 9e-27 42