Gene Information

Name : Despr_1361 (Despr_1361)
Accession : YP_004194815.1
Strain : Desulfobulbus propionicus DSM 2032
Genome accession: NC_014972
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 1545194 - 1546471 bp
Length : 1278 bp
Strand : -
Note : COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR017476: IPR001732: IPR014026: IPR014027; KEGG: vex:VEA_001773 UDP-glucose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisat

DNA sequence :
ATGCCCGTTCTGGAAAATAGCCGTATCGGCATCATTGGTCTTGGTTATGTCGGCCTGCCCCTGGCCGTGGAATTCAGCAA
GAAAGTCCCGACCGTGGGCTTTGATCTCAAGGCGCAGCGAATCGATGAGTTGCGGCGCCACATCGATGTCACCCGCGAGG
TTTCCAGCGAAGAGCTCAGGCAGGCGGGGGAACTGCACTATACCTGCGATATCGAGGAATTGCGGCCCTGCAACGTGTTT
ATCGTCGCCGTACCGACCCCGATCGACACCAACAAGCGGCCCGATTTCACCCCCCTGATCCGGGCCTCGGAAACCGTGGC
CAAGGTGCTGAACAAGGGCGACGTGGTTATTTACGAGTCCACCGTCTATCCGGGGGCCACCGAGGAAGTCTGCGTGCCGA
TCCTGGAACGGGACAGCGGCCTGGCGTTCAACCGCGACTTTTTTGCCGGCTACAGCCCGGAGCGGATCAACCCCGGCGAC
CACGAGCACCGGCTGCCGACGATCATGAAGGTCACTTCCGGCTCGACTCCGGAAATCGCCGACTTTGTCGACGCCCTCTA
CGGCCTGGTGATCACCGCCGGCACCTTCAAGGCCAGTTCCATCCGGGTGGCCGAGGCGGCCAAGGTGATCGAGAACACCC
AGCGCGACGTCAACATCGCCCTGATCAACGAGCTGGCCCTGATTTTCAACCGTCTGGGCATCAACACCCATGAAGTGCTC
AAGGCGGCCGGCACCAAGTGGAACTTCCTGCCCTTCCGCCCCGGCCTGGTCGGCGGTCACTGTATCGGCGTCGATCCCTA
CTATCTGACCCACAAGGCCCAGGAGGTCGGCTACCATCCGGAGATGATCCTGGCCGGCCGCCGGCTCAACGACGACATGG
GCCGCTACATCGCCTCGGAAACGGTCAAGCTGATGCTCAAGCGCCGCATCCACGTAGCCGACGCCCACATCCTCGTTCTT
GGCCTGACCTTCAAGGAGAACTGCCCCGACCTGCGCAACACCCGGGTGATCGACATCATTGACGAACTGGGAACCTTCGG
TGCCAGGGTCGAGGTCCACGATCCCTGGGTGGATCAGGACGAAGCCCGGCGCCTGTACGGGGTCACCATGATCGACCCCC
CGTCCCAGGGCCGCTACGACGCGGTGATCCTGGCCGTGGCCCACCGGGAATTCGCCACCCTCTCCGCCGAACAGCTGCGG
GCCCTGTGCAAACCCGCGGCGGTAATCTACGACGTCAAGAGCACCCTGCCCCCGGAGGCGGTCGACGGCTGCCTCTGA

Protein sequence :
MPVLENSRIGIIGLGYVGLPLAVEFSKKVPTVGFDLKAQRIDELRRHIDVTREVSSEELRQAGELHYTCDIEELRPCNVF
IVAVPTPIDTNKRPDFTPLIRASETVAKVLNKGDVVIYESTVYPGATEEVCVPILERDSGLAFNRDFFAGYSPERINPGD
HEHRLPTIMKVTSGSTPEIADFVDALYGLVITAGTFKASSIRVAEAAKVIENTQRDVNIALINELALIFNRLGINTHEVL
KAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQEVGYHPEMILAGRRLNDDMGRYIASETVKLMLKRRIHVADAHILVL
GLTFKENCPDLRNTRVIDIIDELGTFGARVEVHDPWVDQDEARRLYGVTMIDPPSQGRYDAVILAVAHREFATLSAEQLR
ALCKPAAVIYDVKSTLPPEAVDGCL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 9e-133 61
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 9e-133 61
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-115 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Despr_1361 YP_004194815.1 nucleotide sugar dehydrogenase VFG0431 Protein 4e-133 61