Gene Information

Name : Despr_1278 (Despr_1278)
Accession : YP_004194733.1
Strain : Desulfobulbus propionicus DSM 2032
Genome accession: NC_014972
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 1440165 - 1441259 bp
Length : 1095 bp
Strand : -
Note : COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR004706: IPR002657; KEGG: dps:DP1778 hypothetical protein; PFAM: Bile acid:sodium symporter; SPTR: Conserved hypothetical membrane protein; TIGRFAM: arsenical-resistance protein; PFA

DNA sequence :
ATGTCTCAGCACCAAAAACAACTCAGTTTTCTTGATCGGTATCTTACCCTGTGGATCTTTCTCGCCATGTTCGCCGGGGT
TATGCTCGGTTATGCCGTTCCCGGCGTCCAGCATGTGATCAACGCCTTTCAAGTGGGCACTACCAACATTCCCATTGCCA
TCGGTCTGATCATGATGATGTATCCGCCCTTGGCCAAAGTGAAATACGAGCAACTGGGCCAGGTCTTCCGCAATGGCCGG
GTGCTGCTGCTCTCCCTGGTACAGAATTGGGTGATCGGGCCAGTGCTGATGTTCCTCTTGGCCATCGCCCTGCTTTCCGG
CCAGCAGCACTACATGGTCGGCCTGATCCTCATCGGCTTGGCCCGCTGTATCGCCATGGTCATTGTCTGGAACGATCTGG
CAGACGGCGACACCGAATACTGCGCTGGATTGGTGGCATTCAACTCGATCTTCCAGGTGTTGTTTTTCTCCCTCTACGCC
TGGATCTTCATCACTGTCATTCCCGGCTGGTTCGGCCTGTCCGGAGCAGTGGTCGATGTCTCCATCGGCGAAATCGCCCA
ATCGGTGTTCATTTACCTGGGGATCCCCTTTATCGCCGGCATGCTCAGTCGCCTGATTGGCATCAAGTTGAAAGGCAGAG
ACTGGTATGAAACGGTGTTCATTCCAAAAATTAGCCCGTTGACCCTGATTTTCCTACTCTTCACCATTCTAGTGATGTTC
TCGCTCAAGGGTGAATACATAGTTCAGCTGCCACTCGATGTGTTGCGTATTGCCCTGCCCTTAACCATCTATTTTTTGAT
AATGTTCGGGGTCTCGTTCTTCCTGTCGTTGAAAGCAGGGGCGACCTACGAGCAGACCGTCACCTTGAGCTTCACTGCCG
CGTCCAACAATTTTGAGCTGGCGATAGCCGTGGCCATCGCCGTTTTCGGTATCAACTCCGGCGAAGCCTTTGCTGCGGTC
ATCGGTCCTCTGGTCGAGGTGCCGGTGTTAATCGCTTTGGTTAATGTGGCCCTGCGACTGAAGAATAAATATTTTCCCTA
TGAACAGCGGACCCTGACCGGGGTCTGCCATGTGCGAGTCAAACCCGAGAGGTAA

Protein sequence :
MSQHQKQLSFLDRYLTLWIFLAMFAGVMLGYAVPGVQHVINAFQVGTTNIPIAIGLIMMMYPPLAKVKYEQLGQVFRNGR
VLLLSLVQNWVIGPVLMFLLAIALLSGQQHYMVGLILIGLARCIAMVIVWNDLADGDTEYCAGLVAFNSIFQVLFFSLYA
WIFITVIPGWFGLSGAVVDVSIGEIAQSVFIYLGIPFIAGMLSRLIGIKLKGRDWYETVFIPKISPLTLIFLLFTILVMF
SLKGEYIVQLPLDVLRIALPLTIYFLIMFGVSFFLSLKAGATYEQTVTLSFTAASNNFELAIAVAIAVFGINSGEAFAAV
IGPLVEVPVLIALVNVALRLKNKYFPYEQRTLTGVCHVRVKPER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 8e-76 64
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 6e-94 63
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 5e-94 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Despr_1278 YP_004194733.1 arsenical-resistance protein BAC0573 Protein 5e-111 70
Despr_1278 YP_004194733.1 arsenical-resistance protein BAC0004 Protein 3e-75 52