Gene Information

Name : VVMO6_04460 (VVMO6_04460)
Accession : YP_004191685.1
Strain :
Genome accession: NC_014966
Putative virulence/resistance : Virulence
Product : TRAP-type C4-dicarboxylate transporter large permease
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 1692993 - 1694294 bp
Length : 1302 bp
Strand : +
Note : -

DNA sequence :
ATGGAATGGCAATTAATTCTTACCTTATTTGGCAGCTTCGCTGTATTACTGGCAATTGGTGTACCGGTTTCCTTCGCCAT
TGGTCTTTCTTCACTGGCAACCATTTTAATGGGCCTACCATTAGAGCCGGCGATTGCCGTTGTGGCGCAGCGCATGGCGG
CAGGCCTTGATAACTTTGCTCTGCTGGCTATCCCGTTCTTTATCTTAGCGGGCAACATCATGAACCAAGGTGGTATCGCA
CTACGCCTGATTAACTTTGCCAAAGTGTTAGGTGGCCGTCTTCCTGGTTCCCTAGCGCACGTGAACGTGATGGCGAACAT
GATGTTTGGCTCAATTTCTGGCTCAGCCGTCGCATCTGCCGCAGCGGTTGGCGGCACTATGTCGCCACTGCAAAAGAAAG
ATGGCTACGATGAAAACTTTTCTGCCGCGGTGAACATCACCTCTTGTCCATCGGGTTTATTGATCCCGCCAAGTAACACC
CTGATCGTGTTCTCGTTAGTCTCTGGTGGTACCTCTATCGCGGCGCTGTTCCTTGCCGGTTACATTCCGGGCATTTTGAT
GGGTCTGAGCATCATGGTGGTGGCTGGGATCATCGCCAAACGTCGTGGTTACCCAATTGCTGCTCGCCCAACGCTAGCGA
TGGTTTGGGATACCTTTCTAAAAGCGGCGCCTTCACTGGCTCTGATTGTGGTCATCATGGGTGGCATCATCGGCGGTATC
TTTACGGCTACCGAAGCCTCTGCCATCGCCGTGGTCTACACCTTTGTTTTAGCGGTGTTGGTGTATCGCGAAGTGAAATG
GCGAGATCTTCCTAAGATCATTTTGGAATCTGCCGTCACCACATCGATTGTTTTGCTGTTGGTTGGCGCGTCTATGGGCA
TGTCTTGGGCGATGGCGAATGCCGACATTCCATACATGATTGCCGATGCGCTGCTGGCGATCTCTGACAACCCAATGATG
ATTCTGCTCATCATCAACATCATCTTGCTGATTGTCGGTATCTTCATGGATATGACGCCAGCGGTACTGATCTTCACGCC
GATCTTCCTGCCAATCGCGCTGGATATGGGCATCGACCCGGTTCACTTCGGCATCATGATGACCTTCAACTTGGCGATCG
GCATCTGTACTCCACCGGTAGGTAGTGCGTTGTTTATCGGTTGTTCTGTGGCGAATGTTGCGATCGACAAAGTGATCAAG
CCGCTTCTGCCATTCTACGTTGCACTGATTGCGGCCCTAATGGCGGTGACCTTTATTCCTGAACTCAGTCTGTTCTTACC
AAAACTGGTCCTAGGCTACTAA

Protein sequence :
MEWQLILTLFGSFAVLLAIGVPVSFAIGLSSLATILMGLPLEPAIAVVAQRMAAGLDNFALLAIPFFILAGNIMNQGGIA
LRLINFAKVLGGRLPGSLAHVNVMANMMFGSISGSAVASAAAVGGTMSPLQKKDGYDENFSAAVNITSCPSGLLIPPSNT
LIVFSLVSGGTSIAALFLAGYIPGILMGLSIMVVAGIIAKRRGYPIAARPTLAMVWDTFLKAAPSLALIVVIMGGIIGGI
FTATEASAIAVVYTFVLAVLVYREVKWRDLPKIILESAVTTSIVLLLVGASMGMSWAMANADIPYMIADALLAISDNPMM
ILLIINIILLIVGIFMDMTPAVLIFTPIFLPIALDMGIDPVHFGIMMTFNLAIGICTPPVGSALFIGCSVANVAIDKVIK
PLLPFYVALIAALMAVTFIPELSLFLPKLVLGY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 6e-53 41
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 6e-53 41
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 5e-53 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VVMO6_04460 YP_004191685.1 TRAP-type C4-dicarboxylate transporter large permease VFG1110 Protein 3e-53 41