Gene Information

Name : VVMO6_04397 (VVMO6_04397)
Accession : YP_004191622.1
Strain :
Genome accession: NC_014966
Putative virulence/resistance : Resistance
Product : macrolide export ATP-binding/permease MacB
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 1624529 - 1625221 bp
Length : 693 bp
Strand : -
Note : -

DNA sequence : 
ATGTCGAACACGCCGCTGGTTGAACTGACCAATATTTGCAAATTTTACTCCAGTGGCGAGGCGGAGGTACGCGCGCTAGA
TTGCGTTGACCTCACCATTCACCAAGGTGAGTTTTTGTCCATTCTGGGGCCGTCGGGTTCAGGAAAATCGACCCTAATGA
ACATGCTTGGCTGCCTTGATAAACCCACCGAGGGCGAATATCAACTCGCTGGCCAGAACGTTGCTAGTTTAAGTGCCAAC
GAGCTGGCAAGTATTCGCAATCAGAAGATCGGTTTTGTCTTTCAAAGCTTCAACCTGCTGGAATACGCCACTGCGCTAGA
TAACGTGGCCTTGCCGCTGGTGTACTCTGGCATCAAAGCCAAAGAGCGCCGCCAGCGCGCGGCCAAATTGTTAGCGCAAG
TGGGGCTGGGGGATAGGCTAGACCACAAACCAAACCAGCTTTCCGGCGGCCAAAAACAGAGGGTGGCGATTGCCAGAGCC
TTGGTGAACGATCCGCAAATCATCTTAGCGGATGAACCTACAGGGGCATTGGATTCGAAATCGGGTGCGGAGATTGAAGC
GCTGTTTAATCAACTCCACGCCGAAGGCAGAACGCTCATCATCGTGACGCACGACAACGCTTTAGCCGAGCGCACCAAAC
GCATTATCACCATTAAAGATGGCAAGGTAATCTCAGACAGAGCGCCGAGTTAG

Protein sequence : 
MSNTPLVELTNICKFYSSGEAEVRALDCVDLTIHQGEFLSILGPSGSGKSTLMNMLGCLDKPTEGEYQLAGQNVASLSAN
ELASIRNQKIGFVFQSFNLLEYATALDNVALPLVYSGIKAKERRQRAAKLLAQVGLGDRLDHKPNQLSGGQKQRVAIARA
LVNDPQIILADEPTGALDSKSGAEIEALFNQLHAEGRTLIIVTHDNALAERTKRIITIKDGKVISDRAPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VVMO6_04397 YP_004191622.1 macrolide export ATP-binding/permease MacB NC_012469.1.7686878. Protein 2e-58 55
VVMO6_04397 YP_004191622.1 macrolide export ATP-binding/permease MacB NC_008702.1.4606598. Protein 1e-50 50
VVMO6_04397 YP_004191622.1 macrolide export ATP-binding/permease MacB CP001581.1.gene598.p Protein 1e-40 44
VVMO6_04397 YP_004191622.1 macrolide export ATP-binding/permease MacB CP001581.1.gene798.p Protein 9e-37 42
VVMO6_04397 YP_004191622.1 macrolide export ATP-binding/permease MacB NC_012469.1.7685735. Protein 4e-33 41