Gene Information

Name : VVMO6_04384 (VVMO6_04384)
Accession : YP_004191609.1
Strain :
Genome accession: NC_014966
Putative virulence/resistance : Virulence
Product : DNA-binding heavy metal response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1612216 - 1612911 bp
Length : 696 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACTTCTGATCATTGAAGACGAAAAGAAAACCGGGACGTATTTAAGAAAAGGACTTTCAGAAGCAGGCTATCTCGT
CAATCTCGCCTGCGATGGGGTTGATGGCCTCTATCAAGCCACCAGCCAACGCTATGATTTAATTGTACTGGACGTGATGT
TGCCTCACCTCAATGGTTGGCAAGTGTTACGCGCTCTGCGCAGTAATCAAGTCGATACCCCAGTGATTCTGCTCACCGCA
CGCGACCAAGTCGAAGATCGAGTCAAAGGACTGGAACTGGGCGCTGATGATTACATCGTTAAACCCTTCGCCTTTGTCGA
ACTGTTGGCGCGCATTCGCACCGTGCTCAAACGCCAACAACCCACCACCCAAAGCACCACCCGGCTTTCCATCGCCAATC
TCCATCTGGATCTGTTGCGACGCAAAGTGTTTCGCGACAAAGAACCCATTGCCCTCACCGCCAAAGAGTTTGCCTTGTTG
GAGCTGTTTATGCGCAAAACGGGGGAAGTGATGTCGCGCAGCCAAATAGCCTCTTCCGTTTGGGACATGAATTTCGACAG
TGACACCAATGTCATCGACGTGGCCGTGCGGCGGCTGCGCAATAAAGTCGACAAACCGTTTGAGCCGAAATTGATTCACA
CTGAACGTGGCATGGGCTACGTGCTTGAGGAGCGAGAGCCTTGTTATGGGATTTAG

Protein sequence : 
MKLLIIEDEKKTGTYLRKGLSEAGYLVNLACDGVDGLYQATSQRYDLIVLDVMLPHLNGWQVLRALRSNQVDTPVILLTA
RDQVEDRVKGLELGADDYIVKPFAFVELLARIRTVLKRQQPTTQSTTRLSIANLHLDLLRRKVFRDKEPIALTAKEFALL
ELFMRKTGEVMSRSQIASSVWDMNFDSDTNVIDVAVRRLRNKVDKPFEPKLIHTERGMGYVLEEREPCYGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-60 59
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-59 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator BAC0197 Protein 2e-68 63
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator BAC0083 Protein 1e-64 62
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator BAC0111 Protein 8e-66 60
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator BAC0638 Protein 4e-59 60
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator BAC0125 Protein 3e-65 60
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator BAC0308 Protein 5e-63 59
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator BAC0347 Protein 3e-57 54
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator HE999704.1.gene1528. Protein 5e-30 47
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator NC_010079.5776364.p0 Protein 2e-36 43
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator NC_002952.2859858.p0 Protein 2e-36 43
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator NC_007622.3794948.p0 Protein 2e-36 43
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator NC_003923.1003417.p0 Protein 2e-36 43
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator NC_013450.8614146.p0 Protein 2e-36 43
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator NC_002951.3238224.p0 Protein 2e-36 43
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator NC_007793.3914065.p0 Protein 2e-36 43
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator NC_002758.1121390.p0 Protein 2e-36 43
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator AE015929.1.gene1106. Protein 5e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator VFG0596 Protein 4e-61 59
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator VFG1390 Protein 9e-44 46
VVMO6_04384 YP_004191609.1 DNA-binding heavy metal response regulator VFG1389 Protein 3e-36 43