Gene Information

Name : VVMO6_04379 (VVMO6_04379)
Accession : YP_004191604.1
Strain :
Genome accession: NC_014966
Putative virulence/resistance : Virulence
Product : C4-dicarboxylate transport transcriptional regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 1605431 - 1606807 bp
Length : 1377 bp
Strand : -
Note : -

DNA sequence :
ATGGACAAGTGGTATTTCTCGATGGATGCAGTTTCTTTCCCCCATATCGCCCTGATTGAAGACGATGAAATCGTCCGCCA
AGCAACTGCCCAATGGTTGCAACTGGCTGGCTTCCACGTTGAGGCATTTAGTCATGGTCTCCCAGCCCTTGCGGCGATCA
AAACCGGCGATTTTGACGGTATCGTCAGCGATGTGCGTTTGCCGGATGTGGATGGCATCACGCTGCTGGCCGAGTTGCAG
CGAGAACAAGTAGGCTGCCCGATCATCTTGGTCACTGGGCATGGCGATGTCGATATGGCGGTGAAGGCGCTGCAAAATGG
CGCGTACGATTTCATTGAGAAACCGTTTAATCCTGATCGCCTCGCGTCGACACTGCAGCGCGCGGTGAGCGAATATCAGC
AGCAAGCCGACTATGGCAACCGCAGCCACTATCTGCAGCAACTCAGTGGCATTGAGCAGGTCTTGATTGGTCAAAGCGCG
ATCATGTGCCAGTTGCGTGAGCAAGTCGCCCGCGTTGCCAGCATGGACACCAATGTGATCATCTATGGCGAAACGGGAAC
CGGAAAGGAGTTGGTGGCGCGCAGCTTACATACTGAAAGCGCACGACGAGCCAACCCATTTGTTGCCATCAACTGTGGCG
CGATTCCGGAAAATCTCTTTGAAAGCGAGCTATTTGGTCATGAGGCCGGGGCGTTTACGGGCGCCAGTAAGCGCCGCATT
GGTAAGCTTGAGTATGCCGATAAAGGCACCTTGTTTATGGACGAAATTGAAAGCATGCCGATGGCGATGCAAGTCAAAGT
GTTGCGCAGTTTGCAAGAAAATCAGGTGGAGCGTGTGGGTGCCAACCGACCAGTAAATGTGGATTTACGCGTGGTGGCGG
CAGCAAAGGAGAACTTGTTTAACCATCCCGCTTTTCGTCAGGATCTGTTTTATCGTCTCAATGTGGCGCAGTTGCACTTG
CCGCCATTGCGTGAGCGAGAGGAAGACGCATTGCTGCTGTTTGAACATTTTGCTGCGCAAGCTAACCCGAATAAGCGTCG
GCTCAGTGCTGCCGATTCGCGCGCGTTGTTAAGCTATGCATGGCCGGGCAATGTGCGTGAGCTGCGCAATGTCGCGGTAC
GTTTTGCGCTGGATGAGAGCTTGTCGGTGATGGAGATCCTTTCGAGCCGCGCGGCGATGGTGCAAGAGAGCTTGCCCGTT
GGTGTGCCACTGGCCATCCAACTGCACAATTTTGAGCGCAAGGTGATTCACGATGCTTTAGTGCGCCACCAAGGCAGCAT
TTTGGAGGTGATGAACGAGCTTGATCTTCCTCGTCGCACCCTCAACCAAAAAATGCAGAAGCTCGGTCTGAATCGCGCCG
ATTACACCGACAGCTGA

Protein sequence :
MDKWYFSMDAVSFPHIALIEDDEIVRQATAQWLQLAGFHVEAFSHGLPALAAIKTGDFDGIVSDVRLPDVDGITLLAELQ
REQVGCPIILVTGHGDVDMAVKALQNGAYDFIEKPFNPDRLASTLQRAVSEYQQQADYGNRSHYLQQLSGIEQVLIGQSA
IMCQLREQVARVASMDTNVIIYGETGTGKELVARSLHTESARRANPFVAINCGAIPENLFESELFGHEAGAFTGASKRRI
GKLEYADKGTLFMDEIESMPMAMQVKVLRSLQENQVERVGANRPVNVDLRVVAAAKENLFNHPAFRQDLFYRLNVAQLHL
PPLREREEDALLLFEHFAAQANPNKRRLSAADSRALLSYAWPGNVRELRNVAVRFALDESLSVMEILSSRAAMVQESLPV
GVPLAIQLHNFERKVIHDALVRHQGSILEVMNELDLPRRTLNQKMQKLGLNRADYTDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 2e-58 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 2e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VVMO6_04379 YP_004191604.1 C4-dicarboxylate transport transcriptional regulatory protein VFG1249 Protein 8e-55 41