Gene Information

Name : VVMO6_04105 (VVMO6_04105)
Accession : YP_004191330.1
Strain :
Genome accession: NC_014966
Putative virulence/resistance : Virulence
Product : TRAP-type transporter small permease
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3090
EC number : -
Position : 1294149 - 1294655 bp
Length : 507 bp
Strand : -
Note : -

DNA sequence :
ATGTTACGCAAGATCTTCGATAATTTAGAAGAGATCATCACAGTGCCACTTATGGCCTCTCTTCTTGTTGTGCTGACATG
GCAAATTGCGACGCGCTGGTTACTTAACGATCCTTCACTATGGAGTGAAGAGTTAGCGCGAGTGCTGTTTATGTATATGT
CGCTCATTGGCTGTGCCATCGCTATCAAACGTGGAACTCACGTCAATATCACGTTTTTCTCAGATAAGTTGCCAGAAAAA
ATACGCCTTTTGTTGGTGTTGTCCTTGGAAGCTGCGGTATTGGTTTCGATATTCGCCATCATTTATTTGGGCTATCAACA
CGTGGAAAGAACCGCCTTTTTTGAATTGATTACCTTAGGTGTGTCCAGCAAATGGATGAACTACAGTTTACCCCTTGGCG
GGCTTTTCATGGTGATTCGTCAATTGCAAAAAATGGTCGGTATTGTGACGGAATTTCGTCAGCAGTGCGGTGTCGTTACC
GCGTCGAATCATGCAGAGCAAAGGTAA

Protein sequence :
MLRKIFDNLEEIITVPLMASLLVVLTWQIATRWLLNDPSLWSEELARVLFMYMSLIGCAIAIKRGTHVNITFFSDKLPEK
IRLLLVLSLEAAVLVSIFAIIYLGYQHVERTAFFELITLGVSSKWMNYSLPLGGLFMVIRQLQKMVGIVTEFRQQCGVVT
ASNHAEQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1778 NP_231413.1 hypothetical protein Not tested VPI-2 Protein 8e-45 83
VC0395_A1376 YP_001217319.1 hypothetical protein Not tested VPI-2 Protein 8e-45 83
VPI2_0026c ACA01843.1 TRAP-type C4-dicarboxylate transport system small permease component Not tested VPI-2 Protein 6e-45 83

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VVMO6_04105 YP_004191330.1 TRAP-type transporter small permease VFG1111 Protein 2e-45 83