Gene Information

Name : VVMO6_04104 (VVMO6_04104)
Accession : YP_004191329.1
Strain :
Genome accession: NC_014966
Putative virulence/resistance : Virulence
Product : TRAP-type transporter large permease
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 1292856 - 1294139 bp
Length : 1284 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTGGTTCAATTTTTGGTTGGCTAGGCTTGCTTTTTGCTGGCATGCCAGTTGGCTTTTCTCTGATTTTTGTGGCGTT
GGTTTTTCTTATTGTTACCAACAGCACAGGTATTAACTTCGCAGCGCAGCAGATGCTGGGCGGCATCGATAATTTTACGT
TATTGGCCGTACCATTCTTCGTCCTAACGGGCCATTTGATGAACAGTGCCGGTATTACGGAGCGAATTTTTAACTTTGCC
AAATCCATGGTTGGCCATATCACGGGCAGTCTAGGGCATGTAAACATCATGGCGAGTTTACTCTTTTCTGGTATGTCTGG
CTCTGCGCTTGCCGATGCCGGAGGCTTGGGGCAGCTTGAAATCAAATCAATGCGTGACGCGAAATACGATGATGATTTTG
CTGGTGGTCTCACGGCGGCCTCGTGCATCATTGGTCCGCTTGTTCCGCCTTCTGTGCCATTGGTGATTTATGGTGTGGTG
TCCAACACATCGATTGGTGCGTTGTTTTTAGCCGGTGCAATACCAGGCATATTGTGCTGCGTGGCTTTGATGGTGATGAG
CTATTTCATCTGTAAGAAACGTGGCTACATGACCTTGCCAAAAGCGTCGAGAAAGGAGCAGTTCACATCGTTCAAAGAGG
CATTTCTTTCTCTAATGACTCCGGTCATCATCATTGGCGGGATCTTTTCGGGTAAGTTCACCCCGACGGAAGCAGCAGTG
GTTTCCTCTCTTTACGCTTTGTTCCTTGGTACCGTGGTGTACAAACAGCTGACCTTGACGGGGTTTGTGGAAATTCTGCG
CGAAACCGTGAATACCACCGCTGTTGTTGCCTTGATGGTGATGGGGGTAACGGTGTTTGGCTGGATCGTGGCGCGTGAGC
AATTACCACAGATGCTTGCGGATTATTTCTTGTCGATCAGTGAAAACCCATTGGTACTACTGCTACTCATCAACTTGCTC
TTGCTGTTTTTGGGAACCTTCATTGAATCACTCGCGCTATTGCTATTGCTGGTTCCATTTTTAGTCCCAGTGGCATCAGC
GGTCGGGATTGACCCTGTGCACTTTGGTGTTATGGCCATTTTGAACTTGATGATCGGCATTCTCACGCCACCAATGGGCA
TGGCTTTATATGTGGTGTCACGTGTCGGAGACATTCCATTTCATACCTTAACTCGAGGCGTACTTCCTCTTCTGGTGCCA
TTGTTTATTGTGCTGGCGCTGGTGGCGGTATTCCCTCAAATCACCTTGCTATTGCCTGAGCTGCTTTTGGGTTACGGACA
ATAA

Protein sequence : 
MAGSIFGWLGLLFAGMPVGFSLIFVALVFLIVTNSTGINFAAQQMLGGIDNFTLLAVPFFVLTGHLMNSAGITERIFNFA
KSMVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSMRDAKYDDDFAGGLTAASCIIGPLVPPSVPLVIYGVV
SNTSIGALFLAGAIPGILCCVALMVMSYFICKKRGYMTLPKASRKEQFTSFKEAFLSLMTPVIIIGGIFSGKFTPTEAAV
VSSLYALFLGTVVYKQLTLTGFVEILRETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYFLSISENPLVLLLLINLL
LLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNLMIGILTPPMGMALYVVSRVGDIPFHTLTRGVLPLLVP
LFIVLALVAVFPQITLLLPELLLGYGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 2e-147 96
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 2e-147 96
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 2e-147 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VVMO6_04104 YP_004191329.1 TRAP-type transporter large permease VFG1110 Protein 1e-147 96