Gene Information

Name : VVMO6_00498 (VVMO6_00498)
Accession : YP_004187723.1
Strain :
Genome accession: NC_014965
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 552814 - 555375 bp
Length : 2562 bp
Strand : -
Note : -

DNA sequence :
GTGAAAGCTGAACAACAACATACCCCAATGATGCAGCAATACCTCAGATTGAAGGCAGAAAATCCCGATATTTTGCTGTT
TTATCGCATGGGCGACTTCTACGAACTTTTTTACGATGATGCAAAGAAGGCGTCGCAATTGCTGGATATTTCTCTCACCA
AGCGCGGTGCTTCGGCAGGAGAACCCATTCCGATGGCGGGTGTGCCATTCCATGCCGTTGAAGGGTATTTAGCCAAATTG
GTTCAGCTTGGGGAGTCGGTGGCGATCTGCGAACAAGTTGGCGATCCTGCCACCAGTAAAGGCCCAGTAGAGCGTAAAGT
CGTTCGTATTGTCACGCCAGGTACGGTAACGGATGAAGCTTTACTGTCTGAACGTTTGGATAACTTAATTGCCGCGATTT
ATCACCACAATGGTAAATTCGGCTACGCCACCTTGGATGTCACCTCTGGTCGTTTCCAATTGGTTGAACCCCAGTCAGAA
GAGGCAATGGCAGCTGAGCTACAACGCACCTCTCCGCGTGAGTTACTCTTCCCAGAAGATTTTGAGCCCGTTCATTTGAT
GACAGGTCGTAACGGCAACCGTCGTCGTCCAGTTTGGGAGTTCGAACTCGAAACGGCCAAACAACAGCTCAACCAGCAAT
TTGGCACCAAAGACTTGGTCGGTTTTGGCGTAGAAAATGCGGTTTTAGGATTGTGCGCCGCAGGTTGCTTGATCCAATAT
GTCAAAGATACTCAACGTACAGCACTTCCTCATATCCGCGCGCTTACTTATGATCGGCAAGACGACTCGGTTATCCTTGA
TGCCGCGACCAGACGCAATCTCGAACTGACTCAAAACCTTGCTGGCGGAAGTGACAACACGCTTGCTGCGGTTTTGGATC
GTTGTGCAACGCCGATGGGAAGCCGGATGCTGAAACGTTGGATCCATCAACCAATGCGCTGTATTACCACGCGAGAGCAT
CGCCTAGACGCCATCGCCGAACTGAAAGAACAAGCTCTATTTAGCGATATTCATCCTGTGGTGAAACAAATCGGCGATAT
TGAACGTATTTTGGCTCGCTTAGCACTCCGCTCTGCTCGTCCACGCGATCTCGCGCGATTACGCCATGCGATGCAACAGC
TACCCGAATTGGCTCAAACGCTGTCTTCACTGGGCAATAGCCATCTCAAATCACTGGCCACGGCAGCCGCTCCAATGGAT
GATGTGTGTGAATTGCTCGAGCGTGCCATTAAAGAAAACCCGCCGGTCGTGATTCGCGATGGTGGGGTCATTGCCGAAGG
GTACAGCGCTGATTTGGATGAATGGCGCGATCTTGCAGACGGTGCCACGGGCTACTTGGAAAAACTCGAAGAGGAAGAGC
GTGATCGCCACGGTATCGATACACTGAAAGTGGGATACAACAATGTCCACGGTTTCTACATCCAAGTAAGCCGCGGCCAA
AGCCATTTGGTTCCACCACACTATGTTCGCCGTCAAACGCTGAAAAACGCTGAACGCTACATCATTCCTGAACTGAAAGA
GCACGAAGACAAAGTTCTCAACTCAAAATCCAAAGCGTTAGCCATTGAAAAGCAACTGTGGGAAGAGCTCTTTGATTTAT
TGCTCCCTCACCTAGCCCGTTTGCAAGAGTTGGCATCAGCGGTTGCACAATTGGATGTATTGCAAAATTTGGCGGAGCGT
GCTGATACACTGGATTATTGCCGCCCAAACTTAACCAAAGATCCCGTCGTTCACATTACCGCGGGTCGTCACCCTGTGGT
TGAACAAGTCACTTCCGATCCCTTTATTGCCAACCCAATTGAACTGAACAGCCAACGTAAAATGTTGATCATCACCGGTC
CAAACATGGGGGGTAAGTCCACCTACATGCGCCAAACCGCATTGATTGCTTTAATGGCGCACATTGGTTCTTACGTTCCT
GCAGAATCGGCCACCATTGGCTCAATTGATCGCATCTTTACTCGAATTGGTGCATCGGATGATCTCGCGTCAGGTCGTTC
AACCTTCATGGTAGAAATGACAGAAACAGCCAATATCTTGCACAACGCGACAGCAAATAGCTTAGTTTTGATGGATGAAA
TTGGCCGTGGTACCAGTACCTATGATGGTCTTTCCCTAGCGTGGGCAAGCGCACACTGGCTTGCGACTCAGATTGGGGCA
ATGACGCTATTTGCGACGCATTACTTTGAACTGACAGAACTGCCAAATCAACTCCCTCACTTGGCCAACGTGCATCTTGA
TGCGGTTGAGCATGGCGACAGCATCGCCTTTATGCACGCCGTACAAGAAGGGGCGGCGAGCAAATCCTACGGTTTGGCTG
TGGCGGGGTTAGCGGGCGTTCCAAAAACGGTGATTAAAAACGCCCGTCAAAAATTGTCTCAACTTGAGCTACTCAGCGCA
GAGGGTTCGCAGCCGAAAGCAAGAACGGTGGATATCGCTAACCAATTGAGCCTCATTCCAGAGCCAAGTGAAGTAGAACA
AGCGTTGGCCAGCATCGATCCGGATGATCTGACCCCACGCCAAGCGTTAGAAGCCCTATATCGTTTAAAGAAAATGCTCT
AA

Protein sequence :
MKAEQQHTPMMQQYLRLKAENPDILLFYRMGDFYELFYDDAKKASQLLDISLTKRGASAGEPIPMAGVPFHAVEGYLAKL
VQLGESVAICEQVGDPATSKGPVERKVVRIVTPGTVTDEALLSERLDNLIAAIYHHNGKFGYATLDVTSGRFQLVEPQSE
EAMAAELQRTSPRELLFPEDFEPVHLMTGRNGNRRRPVWEFELETAKQQLNQQFGTKDLVGFGVENAVLGLCAAGCLIQY
VKDTQRTALPHIRALTYDRQDDSVILDAATRRNLELTQNLAGGSDNTLAAVLDRCATPMGSRMLKRWIHQPMRCITTREH
RLDAIAELKEQALFSDIHPVVKQIGDIERILARLALRSARPRDLARLRHAMQQLPELAQTLSSLGNSHLKSLATAAAPMD
DVCELLERAIKENPPVVIRDGGVIAEGYSADLDEWRDLADGATGYLEKLEEEERDRHGIDTLKVGYNNVHGFYIQVSRGQ
SHLVPPHYVRRQTLKNAERYIIPELKEHEDKVLNSKSKALAIEKQLWEELFDLLLPHLARLQELASAVAQLDVLQNLAER
ADTLDYCRPNLTKDPVVHITAGRHPVVEQVTSDPFIANPIELNSQRKMLIITGPNMGGKSTYMRQTALIALMAHIGSYVP
AESATIGSIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATANSLVLMDEIGRGTSTYDGLSLAWASAHWLATQIGA
MTLFATHYFELTELPNQLPHLANVHLDAVEHGDSIAFMHAVQEGAASKSYGLAVAGLAGVPKTVIKNARQKLSQLELLSA
EGSQPKARTVDIANQLSLIPEPSEVEQALASIDPDDLTPRQALEALYRLKKML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VVMO6_00498 YP_004187723.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 71