Gene Information

Name : VVMO6_02942 (VVMO6_02942)
Accession : YP_004190167.1
Strain :
Genome accession: NC_014965
Putative virulence/resistance : Unknown
Product : thiamin biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 3150549 - 3152492 bp
Length : 1944 bp
Strand : -
Note : -

DNA sequence :
ATGTCGAATCGCAAGCAAGCGAGACTGGAAGCTAAACAATTCATCGATACACTCTCTGTGCAGCCGTATCCCAATTCCAC
CAAAGTGTATGTCGAGGGCTCTCGCTCAGACATTAGAGTGCCAATGCGCGAAATCTCCTTGGCAGACAGCTTAGTTGGCG
GGACCAAAGAGGCACCGATCTTTCAGCCAAACGAAGCGGTAAGAGTGTATGACACTTCGGGTGTCTACACTGATCCGACC
CATCAAATCGATCTCTATAATGGCCTTCCTAAGTTAAGAGAAGAGTGGATTTCAGAGCGTGCTGATACCGAAGTGCTTGA
TGATGTCAGCTCGGTCTACACGAAAGAGCGCTTAGAAGATGAAACGCTGGACGAGTTGAGATATGGCAATCTGCCTCGTA
TCCGTCGTGCCAAAGCTGGGCATTGTGTCACTCAGTTGCATTATGCGCGTAAGGGAATCATCACCCCGGAGATGGAATAC
ATCGCTTTGCGCGAGAATATGGGGCGCGCCAAATATCAAGATGAAGTTTTGACTCAGCAGCACGCAGGGCAAAGCTTTGG
TGCGAATCTACCTAAGGAAATTACCCCAGAATTTGTGCGCCGTGAAGTGGCGGAAGGTCGCGCGATCATTCCTTCCAACA
TTAATCACCCAGAATCCGAGCCGATGATCATCGGCCGCAACTTCCTTGTGAAAGTTAACGCCAACATTGGTAACTCATCG
GTGACTTCGTCGATCGAAGAAGAAGTCGAGAAGTTGGTGTGGTCGACTCGTTGGGGGGGTGATACGGTGATGGATCTATC
GACCGGGAGAAACATTCATGAAACTCGCGAATGGATTCTACGCAACAGCCCAGTTCCGATTGGAACCGTGCCTATGTATC
AGGCACTAGAGAAGGTCAATGGCGTTGCTGAGAACCTAACGTGGGAAGTGATGCGTGATACGTTGATCGAGCAGGCTGAA
CAGGGGGTGGATTACTTCACGATTCATGCAGGTTTGCTGCTGCGCTATATCCCAATGACGGCGAAACGCGTGACGGGCAT
TGTCTCGCGTGGCGGTTCGATCATCGCTAAGTGGTGTTTGGCACATCATCAAGAGAGTTTCCTCTATACCCATTTCCGCG
AGATTTGTGAGATTTGTGCGAAGTACGATGTGGCGCTCTCATTAGGTGATGGTTTGCGTCCGGGCTCGATTGCCGATGCC
AATGATGAAGCGCAGTTTGCCGAGCTCAGAACATTGGGTGAACTGACCAAAATCGCGTGGGAATACGATGTCCAAGTGAT
TATTGAAGGTCCTGGGCATGTACCTATGCACATGATTAAAGAGAATATGGATGAGCAGCTCAAGCATTGTCATGAGGCAC
CATTCTATACCTTGGGTCCACTGACCACCGACATTGCCCCTGGCTATGACCACATTACTTCTGGGATTGGTGCAGCCATG
ATTGGTTGGTATGGCTGTGCCATGCTTTGCTACGTAACGCCAAAAGAACACTTAGGTCTACCTAATAAAGAAGACGTGAA
AACCGGCTTGATAACCTACAAACTGGCTGCACACGCGGCGGATTTAGCTAAAGGGCATCCTGGTGCACAAGTACGTGACA
ATGCCTTGTCAAAAGCACGCTTTGAGTTCCGCTGGCAAGATCAGTTCAATCTCTCTCTTGACCCCGATACGGCGCGTGCA
TTCCACGATGAAACCTTACCTCAGGAATCAGGCAAGGTCGCACACTTTTGTTCGATGTGTGGTCCAAAATTCTGCTCGAT
GAAGATTTCGCAAGAGGTTCGTGAGTACGCTAAAGGGCAACAAGGTGAGGCAGGACAGGCGATAGAAGTGAAGCTGTTGG
ATGACCCATTGGAAGGAATGAAGCAAAAATCCGCGGAATTCAAAGCGTCGGGTTCGGAGCTGTACCATCCTGCAGTGAGT
CACGAAGAAGTGGCAGAGGGTTAA

Protein sequence :
MSNRKQARLEAKQFIDTLSVQPYPNSTKVYVEGSRSDIRVPMREISLADSLVGGTKEAPIFQPNEAVRVYDTSGVYTDPT
HQIDLYNGLPKLREEWISERADTEVLDDVSSVYTKERLEDETLDELRYGNLPRIRRAKAGHCVTQLHYARKGIITPEMEY
IALRENMGRAKYQDEVLTQQHAGQSFGANLPKEITPEFVRREVAEGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSS
VTSSIEEEVEKLVWSTRWGGDTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVNGVAENLTWEVMRDTLIEQAE
QGVDYFTIHAGLLLRYIPMTAKRVTGIVSRGGSIIAKWCLAHHQESFLYTHFREICEICAKYDVALSLGDGLRPGSIADA
NDEAQFAELRTLGELTKIAWEYDVQVIIEGPGHVPMHMIKENMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAM
IGWYGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQVRDNALSKARFEFRWQDQFNLSLDPDTARA
FHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYAKGQQGEAGQAIEVKLLDDPLEGMKQKSAEFKASGSELYHPAVS
HEEVAEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 72
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 72
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 69