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Name : VVMO6_02870 (VVMO6_02870) Accession : YP_004190095.1 Strain : Genome accession: NC_014965 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3070180 - 3071679 bp Length : 1500 bp Strand : - Note : - DNA sequence : ATGGTAGATATACTGGATACGGCGCCATCGTATCGCCGTTTACCGTTTAGTTTTGCTAACCGCTTTAAAATGGTGCTGGA AGTCGAGCATCCAGAAAGGCCGCCGGTACTTTACTACGTTGAGCCTCTCAATGCGCAGGCGTTAGTTGAAGTCCGTCGTG TGCTCAAACAGACGTTTGTCCCTCAAGCCATTGCCGCTGAAGCGTTTGAAAAAAAACTGACCGAAGCGTACCAACGCGAC TCGTCAGAAGCGCGCCAGTTGATGGAAGACATTGGCTCGGATGATGACTTCTTCTCTTTGGCTGAAGAGCTGCCGCAAGA TGAAGATTTGCTGGAAGCGGAAGACGATGCGCCGATCATCAAATTGATCAACGCCATGTTGGGCGAAGCGATCAAAGAAG GTGCGTCAGATATTCACATCGAAACGTTCGAGAAAATTCTGTCGATTCGTTTCCGTGTCGATGGCGTTTTGCGCGATGTG TTGTCTCCGAGCCGCAAACTGGCGCCGCTGTTGGTCTCTCGCGTTAAAGTCATGGCCAAACTGGATATTGCAGAAAAACG CGTGCCACAAGATGGCCGTATTTCACTGCGTATCGGTGGTCGTGCGGTCGATGTGCGTGTATCGACCATGCCTTCATCAC ACGGCGAGCGTGTGGTGATGCGTTTGCTGGATAAAAACGCCACTCGCCTTGACCTGCATAGCCTAGGCATGACGCCGGTG AACCACGACAATTTCCGTCATCTTATCTCGCGCCCTCACGGCATTATTTTGGTCACCGGTCCGACGGGTTCGGGTAAATC CACCACCTTGTACGCTGGCCTGCAAGAGCTGAACAGCAACGAGCGCAATATCTTGACGGTGGAAGACCCGATCGAATTTG ATATTGATGGCATTGGCCAAACCCAAGTGAACCCAAAAGTCGACATGACCTTTGCTCGTGGTCTGCGAGCCATTTTGCGT CAAGACCCAGACGTGGTGATGGTCGGGGAAATTCGTGACTTGGAAACCGCGCAAATTGCCGTACAAGCGTCATTGACTGG TCACTTGGTGATGTCAACCTTGCACACCAACACCGCCGTGGGTGCCATTACCCGTCTGCGTGACATGGGCATTGAGCCCT TTTTGATCTCTTCTTCACTGCTGGGTGTGTTGGCTCAGCGCCTGGTGCGGACCTTATGCCAAGACTGTAAAGAACCGTAC GAGGCTGACAAAGAGCAGCGCAAACTGTTTGGCGCGAAGAAGAAAGATGCGCTGACCTTATATCGTGCCAAGGGATGTGA AAAATGTAACCACAAAGGTTATCGTGGCCGTACCGGTATCCATGAGCTGTTGATGGTAGACGATAAAGTCCAAGAGCTGA TCCATGCTGAGGCGGGAGAGCAGGCGATGGACAAATACATCCGTGAACATACTCCGAGCATTCGCAGCGACGGTTTAGAC AAAGTGTTGCAAGGCGTGACGTCACTGGAAGAAGTGATGCGCGTGACCAAGGAATCTTAA Protein sequence : MVDILDTAPSYRRLPFSFANRFKMVLEVEHPERPPVLYYVEPLNAQALVEVRRVLKQTFVPQAIAAEAFEKKLTEAYQRD SSEARQLMEDIGSDDDFFSLAEELPQDEDLLEAEDDAPIIKLINAMLGEAIKEGASDIHIETFEKILSIRFRVDGVLRDV LSPSRKLAPLLVSRVKVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTPV NHDNFRHLISRPHGIILVTGPTGSGKSTTLYAGLQELNSNERNILTVEDPIEFDIDGIGQTQVNPKVDMTFARGLRAILR QDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAITRLRDMGIEPFLISSSLLGVLAQRLVRTLCQDCKEPY EADKEQRKLFGAKKKDALTLYRAKGCEKCNHKGYRGRTGIHELLMVDDKVQELIHAEAGEQAMDKYIREHTPSIRSDGLD KVLQGVTSLEEVMRVTKES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 7e-157 | 67 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-157 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VVMO6_02870 | YP_004190095.1 | general secretion pathway protein D | VFG0182 | Protein | 2e-137 | 68 |
| VVMO6_02870 | YP_004190095.1 | general secretion pathway protein D | VFG2048 | Protein | 2e-155 | 66 |
| VVMO6_02870 | YP_004190095.1 | general secretion pathway protein D | VFG1876 | Protein | 7e-127 | 58 |
| VVMO6_02870 | YP_004190095.1 | general secretion pathway protein D | VFG2426 | Protein | 3e-75 | 46 |
